Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00937 CTGAACCGAGGCATAAGCAGTAAGGCACTACAAACCATTGATGAGCTAAGAGAAGTTGTTCACAAGGAGTGTGGAAGGATCGTTTCTTGTGCAGATATCACTGTCTTGGCTGCTCGTGATGCTGTTTTTCTATCTGGAGGCCCCTATTTTGATGTTCCACTTGGAAGAAGAGACAGTCTAAACTTCAGCATCGAAGAAACAAACAATCTTCCATTACCTTACAACATCACCAATGTCACACTCAAAAAATTTGCATCAAAGAACTTTGATGTTGCAGATGTGGTTGCCTTGTCAGGTGCACACACCATTGGTCGTGCTCACTGTCACACATTCTACAATAGGGTTTCTCCTCAAGACCCTAACATGGACAAAACCTTAGCCAAACTCCTTAATTCTACTTGTCCTACTACGCACTCACGTAACACTTTTCAATTGGACTTTAGAACCCCCAAAGACTTCGATAACAAATACTACATTAACTTAATGAACCACCAAGATGAGCCAATTGGATGTGTTGACACGAAATCAAGGTGA 534 0.4176 LNRGISSKALQTIDELREVVHKECGRIVSCADITVLAARDAVFLSGGPYFDVPLGRRDSLNFSIEETNNLPLPYNITNVTLKKFASKNFDVADVVALSGAHTIGRAHCHTFYNRVSPQDPNMDKTLAKLLNSTCPTTHSRNTFQLDFRTPKDFDNKYYINLMNHQDEPIGCVDTKSR* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00937 177 PRINTS Plant peroxidase signature 8 21 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu4g00937 177 PRINTS Plant peroxidase signature 46 61 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu4g00937 177 PRINTS Plant peroxidase signature 92 104 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu4g00937 177 PRINTS Plant peroxidase signature 27 37 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu4g00937 177 PRINTS Plant peroxidase signature 144 159 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu4g00937 177 PRINTS Haem peroxidase superfamily signature 46 58 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu4g00937 177 PRINTS Haem peroxidase superfamily signature 28 45 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu4g00937 177 PRINTS Haem peroxidase superfamily signature 146 161 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu4g00937 177 PRINTS Haem peroxidase superfamily signature 93 108 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu4g00937 177 Gene3D Peroxidase, domain 2 72 165 - -
Lapu4g00937 177 PANTHER PEROXIDASE 25-RELATED 8 165 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu4g00937 177 FunFam Peroxidase 71 167 - -
Lapu4g00937 177 Pfam Peroxidase 6 164 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu4g00937 177 ProSitePatterns Peroxidases proximal heme-ligand signature. 93 103 IPR019793 -
Lapu4g00937 177 SUPERFAMILY Heme-dependent peroxidases 2 165 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lapu4g00937 177 Gene3D - 2 71 - -
Lapu4g00937 177 ProSiteProfiles Plant heme peroxidase family profile. 1 165 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00937 Lapu-Chr4 24622342 24623796 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00937 2 165 Peroxidase AT1G71695 52.096 1.21e-54 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00937 K00430 - gmx:100816373 280.026