Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00931 ATGGTGAAAGATCTCAGCGGAAACATTAAAGAGATGTTGGGGACTTGCGTGTCGGTTGGGTGCAGTGTCGACGAGAAACACCTCAAGCATATGCAGCAAGAGATTTTCGACTGCCACGTTCAGGTTAGACTTGCGATCTTGTTTGACCCGCATGCTATATTAGGTGATGATGTTCTCATCACCCATCCACTTGTGGCAGAGTAG 204 0.4755 MVKDLSGNIKEMLGTCVSVGCSVDEKHLKHMQQEIFDCHVQVRLAILFDPHAILGDDVLITHPLVAE* 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00931 67 ProSitePatterns Ribosomal protein L11 signature. 10 25 IPR020785 GO:0003735|GO:0005840|GO:0006412
Lapu4g00931 67 Gene3D - 1 42 IPR036769 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00931 Lapu-Chr4 24440605 24441642 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00931 1 42 Cytoplasmic Ribosomal Protein Gene Family AT2G37190 57.143 4.42e-12 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00931 K02870 - gmx:100527860 60.077