Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00923 ATGGACTTCCTCCAAACTGCTGTGTCTCCTCTCACAATTGCAGTTCTAGTCCTAATCCCACCCATCCTCTTCCTTGTCCTCCGCCGTTCCAGAAGCGAGGAACCACCCACAATCCCCGGCGCATGGCCGATCGTCGGCCACCTCCCCCTCCTGGCGCAATCCCCGGCCACCCACCACATCCTGGGTGCTGTGGCCGACAGCCATGGCCCCCTCTTCAGCATTAAGCTAGGCACAGTCAAAACCCTAGTGATCAGCAACTGGGAAACGGCCAAAGAGTGCTTCACCACAAACGACGTCGCTGTGTCCTACCGCCCCAACCTCGTGGCCTGCCAAAACATGACCTACAACCTCGCCATGCTAGGGTTCGCCCCCTATGGCAAATTTTGGCGCGACATGCGCAAGAACCTTGCTTTCGTGTTCCTCGCCGACCACCGCATCGAGGCACTCTCTCACGTGCGCATCTCCGAGGTAAGAACCTCTGCGAAAGAGCTCTACCACAAGTGGGCACGTGGGAAAACGGAGAAGGGGTTTTTGATGGTGGACATGAAGCAGGGGCTGAAGGAGGTTGCGTTCAACGTGGTGCTGAGGATGGTGGCTGGGAAGAGGTACTTCGGAGAAACCGCTGTGGTTGAGGAGGGAGAAGCGCGGGTATGTTTGGCAGCGTTCAAAGAGTACATGCGGCTGTTGGGGGTGTTTGCTGTAGCGGACGCGGTGCCGTGGCTAAGGTGGTTCGATTTAGGAGGGCACGAGAAGGCCATGAAGGAGAATTTCAAGGAGTTGGATGCTGTGGTTGGGGAATGGTTGGAAGAACACAAGAGGAAAAGGAATTTGAATGGCGACAAAGGTGAGAAAGGTGGAGATTTCATGGAAATGATGCTGTCGGAGATCGATGGAACCAACATTCATGGGTTTGATTCTGATACCGTCATTAAAGCCACTGCAATGGCGTTGATTTTGGGAGGAACAGACACAAGCTCAGCTACTAACATATGGACACTGTCTTTGCTACTGAACAATCCTCACACATTGGAGAAATTGATGGAAGAAATTGACACTCACATTGGGAGAGAGAGACTTGTGACTGAGTCAGATCTAAACAAGTTGGTGTATCTTCATGCAGTTGTTAAGGAGTCACTGAGGCTATATCCACCCTCTCCTCTTTCTGGCCCTCGTGAGTTCAGAGAAGATTGCAAGATTGGAGGGTACCATGTGAAGAAAGGAACTCGTCTCATCACAAACCTGTGGAAGATCCAAACAGACCCTAGCATTTGGCCAGAGCCCTTGGAGTTCAAGCCAGAAAGGTTCCTCACCACACACAAAGATGTGGATGTTAAGGGAAAACACTTTGAGCTCATACCTTTTGGAAGTGGCAGGAGAATTTGCCCTGGAATAACTTTTGGCCTTAGAGGTTCTTACTTGACTTTGGCAAACTTTCTTCACTGCTTTGATGTCTCAAAAACTTCATCTGAACCCATAGATATGACTGCAGCAGTGGAAATTACCAATGTTAAAGTCACTCCCCTTGAAGTTCTCATCAAACCTCGTTTGGCTCCTAGTCTTTATGAAAGCATGTAA 1575 0.5048 MDFLQTAVSPLTIAVLVLIPPILFLVLRRSRSEEPPTIPGAWPIVGHLPLLAQSPATHHILGAVADSHGPLFSIKLGTVKTLVISNWETAKECFTTNDVAVSYRPNLVACQNMTYNLAMLGFAPYGKFWRDMRKNLAFVFLADHRIEALSHVRISEVRTSAKELYHKWARGKTEKGFLMVDMKQGLKEVAFNVVLRMVAGKRYFGETAVVEEGEARVCLAAFKEYMRLLGVFAVADAVPWLRWFDLGGHEKAMKENFKELDAVVGEWLEEHKRKRNLNGDKGEKGGDFMEMMLSEIDGTNIHGFDSDTVIKATAMALILGGTDTSSATNIWTLSLLLNNPHTLEKLMEEIDTHIGRERLVTESDLNKLVYLHAVVKESLRLYPPSPLSGPREFREDCKIGGYHVKKGTRLITNLWKIQTDPSIWPEPLEFKPERFLTTHKDVDVKGKHFELIPFGSGRRICPGITFGLRGSYLTLANFLHCFDVSKTSSEPIDMTAAVEITNVKVTPLEVLIKPRLAPSLYESM* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00923 524 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00923 524 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00923 524 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00923 524 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00923 524 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00923 524 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00923 524 PRINTS E-class P450 group I signature 189 207 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00923 524 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00923 524 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00923 524 SUPERFAMILY Cytochrome P450 36 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00923 524 Gene3D Cytochrome P450 28 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00923 524 FunFam Cytochrome P450 82C4 27 513 - -
Lapu4g00923 524 CDD CYP82 69 515 - -
Lapu4g00923 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
Lapu4g00923 524 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00923 524 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00923 524 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00923 524 PANTHER CYTOCHROME P450 82C3-RELATED 15 521 - -
Lapu4g00923 524 Pfam Cytochrome P450 36 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00923 Lapu-Chr4 24298455 24300641 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00923 4 521 Cytochrome P450 AT4G31940 45.714 7.97e-169 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00923 - - gmx:100802193 841.647