Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00878 ATGGAGGCACCATCTCCGACCAAACCCATTGACCCAACAAAGCCTTCCTTCACCACCCTCAGTGTGGAGGCCAACCAGACCGAGCCGAGCCCACTCCGAAAAATGTTTGCTGTGGCGTCCATAGCTGCTGGCATACAATTTGGGTGGGCTCTACAGCTCTCTCTGCTCACCCCTTACGTTCAGCTCTTAGGAGTTCCACACGCCGCAGCCTCCTTCATCTGGCTCTGTGGTCCCATCTCCGGACTTGTGGTGCAGCCCATTGTGGGCTACTACAGTGACAGAAGCACTTCTCGCTTCGGTCGCAGACGCCCCTTTATTCTTGGAGGTGCAGTAGCTGTCGCCATAGCTGTATTCCTTATCGGTTATGCAGCCGATATAGGATACTCAGCGGGTGACGACATAACCAAGAAAACCCGTCCTCGCGCTGTTGCGGTGTTTGTGATCGGATTTTGGATCCTTGATGTTGCTAACAACATGTTACAAGGACCTTGCCGTGCTTTTCTAGCAGACTTAGCAGCTGGGGACCAGCGAAAAACGAGAATAGCCAATGGGTTTTTCTCGTTCTTCATGGCCGTCGGCAACGTGTTGGGATATGCAGCAGGGTCTTTCAGTGGTCTGCACAAGATCTTTCCCTTCACTCAGACCAAGGCGTGCGATGTTTTCTGCGCCAACTTGAAAAGCTGTTTCTTTTTCTCGATCTTGTTGCTGCTGTTCTTGGCCACGGTGGCTCTCATTTACGTAAAGGACAAGCCCGTGGCGGCACGGGTGGTGCAAGAGGACGCGCAGCCCTCGTGTTTCTTTCAGATGTTCGGAGCGTTGAAAGAGCTCAAAAGACCTATGTGGATGCTCATGTTGGTGACAGCTATCAACTGGGTCGGCTGGTTTCCCTACTTCCTGTTCGACACCGACTGGATGGGTCGTGAGGTGTACGGCGGAACGGTCGGCGAGGACGCGTACGCTGCGGGGGTGCGCGTCGGGTCGCTTGGACTCATGATCAACTCCGTAGTTTTGGGATTCATGTCGCTGGCAGTTGAACCGTTGGGTCGCATGGTTGGGGGAGTGAAGAGGCTGTGGGGGATCGTGAACTTCATTCTCGCGATTGGGTTCGGAATGACCATCGTGATAACCAAGGTGGCAGAGCACGAGCGCCACATGAACCCCGCCGCCGTGGGCCACCCATCCGACGGCGTCAAAATTGGATCCATGATTTTCTTTGCCGTTCTCGGAGTCCCTCTTGCGATTACTTTCAGTGTCCCTTTTGCTCTTGCATCAATATACTGCAGTGCTTCAGGAGCAGGCCAAGGTTTATCGTTGGGAGTCCTCAATCTTGCAATTGTGGTACCACAGATGGTGGTGTCTGCATTGAGTGGTCCTTGGGATGCTTTGTTTGGTGGTGGCAACTTGCCGGCTTTCATGGTGGGGGCGGCGGCGGCGGCCTTGAGTGCCATAATGGCGATTGTCTTGCTGCCAACTCCAAAACCAGCTGACGAGGCTAAGGCTGCAAGCATGGTGGGAGGGGGCTTTCACTAG 1530 0.5431 MEAPSPTKPIDPTKPSFTTLSVEANQTEPSPLRKMFAVASIAAGIQFGWALQLSLLTPYVQLLGVPHAAASFIWLCGPISGLVVQPIVGYYSDRSTSRFGRRRPFILGGAVAVAIAVFLIGYAADIGYSAGDDITKKTRPRAVAVFVIGFWILDVANNMLQGPCRAFLADLAAGDQRKTRIANGFFSFFMAVGNVLGYAAGSFSGLHKIFPFTQTKACDVFCANLKSCFFFSILLLLFLATVALIYVKDKPVAARVVQEDAQPSCFFQMFGALKELKRPMWMLMLVTAINWVGWFPYFLFDTDWMGREVYGGTVGEDAYAAGVRVGSLGLMINSVVLGFMSLAVEPLGRMVGGVKRLWGIVNFILAIGFGMTIVITKVAEHERHMNPAAVGHPSDGVKIGSMIFFAVLGVPLAITFSVPFALASIYCSASGAGQGLSLGVLNLAIVVPQMVVSALSGPWDALFGGGNLPAFMVGAAAAALSAIMAIVLLPTPKPADEAKAASMVGGGFH* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00878 509 SUPERFAMILY MFS general substrate transporter 33 494 IPR036259 -
Lapu4g00878 509 Pfam MFS/sugar transport protein 35 294 - -
Lapu4g00878 509 NCBIfam sucrose/proton symporter 31 493 IPR005989 GO:0005886|GO:0008515|GO:0015770
Lapu4g00878 509 FunFam Sucrose transport protein 29 489 - -
Lapu4g00878 509 PANTHER SUGAR TRANSPORTER 31 488 - -
Lapu4g00878 509 CDD MFS_SLC45_SUC 35 472 - -
Lapu4g00878 509 Gene3D MFS general substrate transporter like domains 27 490 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00878 Lapu-Chr4 23014473 23017953 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00878 7 509 Sucrose Transporter Gene Family AT1G22710 61.988 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00878 K15378 - gmx:100786411 900.197