Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00877 ATGGAGGAGCAACCAAAATCGGAACCTAGTCCTCTTCGTAAAATGGTGGCGGTGTCATCCATCGCCGCCGGTATTCAATTTGGATGGGCATTGCAACTCTCCCTGCTAACGCCATACGTCCAAACACTAGGAGTTCCTCACGCATGGGCCTCCTTCATCTGGCTATGTGGCCCCATCTCCGGCCTCCTAGTTCAGCCCATTGTAGGCTACAGCAGTGACCGATGCACATCTTCCTTCGGCCGCCGCCGTCCCTTTATCCTCGCCGGGGCGCTCGCCGTCGCCATCTCCATTTTCTTTATCGGCTACGCTGCCGATATAGGACACATGGCTGGCGATGACATCACCCAGAAAACCCGTCCACGTGCCGTTGCCATCTTCGTCGTCGGCTTCTGGATCCTTGATGTTGCCAACAACATGCTCCAGGGTCCATGCCGTGCCTTCCTCGGTGACTTGGCTGCCGGCGACCAGAAAAAGACGAGAACCGCCAACTCGTTCTTCTCGTTTTTCATGGCTATCGGCAACGTCCTGGGCTATGCCGCAGGATCCTATGATGGTCTCCACAAGATCTTCCCTTTCACAGAAACCGAGGCATGCAACGTCTTCTGCGCAAACCTAAAGAGCTGCTTCTTCTTCTCCATTGTTCTTCTCCTTGTTTTGTGCGCTATCGTTCTCACTTGCGTGAACGACCCTAAGTTTACACCGGCACATGAGGAGAAGGAGGTTGAGGAGGCAGAGAAGACTCACTTTTCGTGCTTCTGCGGAGAGTTGTGCATTGCATTCAAGGGACTGCAGAGGCCAATGTGGATGCTGATGCTGGTGACTGCTATTAACTGGATTGCGTGGTTCCCTTATGTGTTGTTCGACACTGACTGGATGGGTCGTGAGGTGTATGGTGGTGATGTGGGACAGACCGCATATGATGCTGGTGTGCATGCAGGTTCTATGGGGCTCATGTTGAATTCAGTGGTGCTGGCTCTGATGTCGTTGGCTGTAGAGCCATTGGGTCGTATGGTTGGGGGAGTGAAGTGGTTGTGGGCTATAGTTAATGTTCTTCTAGCAATTTGCATGGCAATGACCGTGCTCATCACAAAAATCGCTGAGCAGCAACGAACACTTAACCCTGCTCTCATTGGAGACCCCTCCATTAATGTTAAAGGAGGAGCCTTAGCATTTTTCTCCATCCTTGGTATTCCTCTTGCGGTTACGTATAGTGTCCCTTTCGCTCTAGCATCTATCTACTCCAGCAGCTCAGGATCTGGGCAAGGTTTATCTTTGGGTCTTCTCAATGTTTCAATCGTCGTTCCTCAGATGATTGTATCGGCAATTAGTGGACCATGGGATGCCTGGTTTGGCGGTGGCAACTTGCCGGCGTTCGTGTTGGGAGCGGTGGCTGCCGCCCTCAGTGCCATACTGGCAGTTGTTCTGCTTCCAAACCCGAAGAAAGAAGATGAAGCCAAGATGTCCGCTGTCTCCATGGGGAGTTTCCATTAA 1491 0.5218 MEEQPKSEPSPLRKMVAVSSIAAGIQFGWALQLSLLTPYVQTLGVPHAWASFIWLCGPISGLLVQPIVGYSSDRCTSSFGRRRPFILAGALAVAISIFFIGYAADIGHMAGDDITQKTRPRAVAIFVVGFWILDVANNMLQGPCRAFLGDLAAGDQKKTRTANSFFSFFMAIGNVLGYAAGSYDGLHKIFPFTETEACNVFCANLKSCFFFSIVLLLVLCAIVLTCVNDPKFTPAHEEKEVEEAEKTHFSCFCGELCIAFKGLQRPMWMLMLVTAINWIAWFPYVLFDTDWMGREVYGGDVGQTAYDAGVHAGSMGLMLNSVVLALMSLAVEPLGRMVGGVKWLWAIVNVLLAICMAMTVLITKIAEQQRTLNPALIGDPSINVKGGALAFFSILGIPLAVTYSVPFALASIYSSSSGSGQGLSLGLLNVSIVVPQMIVSAISGPWDAWFGGGNLPAFVLGAVAAALSAILAVVLLPNPKKEDEAKMSAVSMGSFH* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00877 496 Gene3D MFS general substrate transporter like domains 8 481 IPR036259 -
Lapu4g00877 496 PANTHER SUGAR TRANSPORTER 11 475 - -
Lapu4g00877 496 CDD MFS_SLC45_SUC 15 472 - -
Lapu4g00877 496 Pfam MFS/sugar transport protein 27 278 - -
Lapu4g00877 496 FunFam Sucrose transport protein 9 476 - -
Lapu4g00877 496 SUPERFAMILY MFS general substrate transporter 11 483 IPR036259 -
Lapu4g00877 496 NCBIfam sucrose/proton symporter 11 481 IPR005989 GO:0005886|GO:0008515|GO:0015770
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00877 Lapu-Chr4 22987248 22989217 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00877 7 485 Sucrose Transporter Gene Family AT1G22710 62.963 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00877 K15378 - gmx:100785899 814.683