Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00875 ATGGAGGAGCAACCAAAATCGGAACCTAGTCCTCTTCGTAAAATGGTGGCGGTGTCATCCATCGCCGCCGGTATTCAATTTGGATGGGCATTGCAACTCTCCCTGCTAACGCCATACGTCCAAACACTAGGAGTTCCTCACGCATGGGCCTCCTTCATCTGGCTATGTGGCCCCATCTCCGGCCTCCTAGTTCAGCCCATTGTAGGCTACAGCAGTGACCGATGCACATCTTCCTTCGGCCGCCGCCGTCCCTTTATCCTCGCCGGGGCGCTCGCCGTCGCCATCTCCATTTTCTTTATCGGCTACGCTGCCGATATAGGACACATGGCTGGCGATGACATCACCCAGAAAACCCGTCCACGTGCCGTTGCCATCTTCGTCGTCGGCTTCTGGATCCTTGATGTTGCCAACAACATGCTCCAGGGTCCATGCCGTGCCTTCCTCGGTGACTTGGCTGCCGGCGACCAGAAAAAGACGAGAACCGCCAACTCGTTCTTCTCGTTTTTCATGGCTATCGGCAACGTCCTGGGCTATGCCGCAGGATCCTATGATGGTCTCCACAAGATCTTCCCTTTCACAGAAACCGAGGCATGCAACGTCTTCTGCGCAAACCTAAAGAGCTGCTTCTTCTTCTCCATTGTTCTTCTCCTTGTTTTGTGCGCTATCGTTCTCACTTGCGTGAACGACCCTAAGTTTACACCGGCACATGAGGAGAAGGAGGTTGAGGAGGCAGAGAAGACTCACTTTTCGTGCTTCTGCGGAGAGTTGTGCATTGCATTCAAGGGACTGCAGAGGCCAATGTGGATGCTGATGCTGGTGACTGCTATTAACTGGATTGCGTGGTTCCCTTATGTGTTGTTCGACACTGACTGGATGGGTCGTGAGGTGTATGGTGGTGATGTGGGACAGACCGCATATGATGCTGGTGTGCATGCAGGTTCTATGGGGCTCATGTTGAATTCAGTGGTGCTGGCTCTGATGTCGTTGGCTGTAGAGCCATTGGGTCGTATGGTTGGGGGAGTGAAGTGGTTGTGGGCTATAGTTAATGTTCTTCTAGCAATTTGCATGGCAATGACCGTGCTCATCACAAAAATCGCTGAGCAGCAACGAACACTTAACCCTGCTCTCATTGGAGACCCCTCCATTAATGTTAAAGGAGGAGCCTTAGCATTTTTCTCCATCCTTGGTATTCCTCTTGCGGTTACGTATAGTGTCCCTTTCGCTCTAGCATCTATCTACTCCAGCAGCTCAGGATCTGGGCAAGGTTTATCTTTGGGTCTTCTCAATGTTTCAATCGTCGTTCCTCAGATGATTGTATCGGCAATTAGTGGACCATGGGATGCCTGGTTTGGCGGTGGCAACTTGCCGGCATTCGTGTTGGGAGCGGTGGCTGCCGCCATCAGTGCCATACTGGCAGTTGTTCTACTTCCAACCCCAAAGAAATCTGATGAAGCCAAGATGTCTGCCGTCTCCATGGGGAGTTTCCATTAA 1491 0.5198 MEEQPKSEPSPLRKMVAVSSIAAGIQFGWALQLSLLTPYVQTLGVPHAWASFIWLCGPISGLLVQPIVGYSSDRCTSSFGRRRPFILAGALAVAISIFFIGYAADIGHMAGDDITQKTRPRAVAIFVVGFWILDVANNMLQGPCRAFLGDLAAGDQKKTRTANSFFSFFMAIGNVLGYAAGSYDGLHKIFPFTETEACNVFCANLKSCFFFSIVLLLVLCAIVLTCVNDPKFTPAHEEKEVEEAEKTHFSCFCGELCIAFKGLQRPMWMLMLVTAINWIAWFPYVLFDTDWMGREVYGGDVGQTAYDAGVHAGSMGLMLNSVVLALMSLAVEPLGRMVGGVKWLWAIVNVLLAICMAMTVLITKIAEQQRTLNPALIGDPSINVKGGALAFFSILGIPLAVTYSVPFALASIYSSSSGSGQGLSLGLLNVSIVVPQMIVSAISGPWDAWFGGGNLPAFVLGAVAAAISAILAVVLLPTPKKSDEAKMSAVSMGSFH* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00875 496 CDD MFS_SLC45_SUC 15 472 - -
Lapu4g00875 496 Pfam MFS/sugar transport protein 27 278 - -
Lapu4g00875 496 Gene3D MFS general substrate transporter like domains 8 476 IPR036259 -
Lapu4g00875 496 SUPERFAMILY MFS general substrate transporter 11 481 IPR036259 -
Lapu4g00875 496 PANTHER SUGAR TRANSPORTER 11 475 - -
Lapu4g00875 496 NCBIfam sucrose/proton symporter 11 481 IPR005989 GO:0005886|GO:0008515|GO:0015770
Lapu4g00875 496 FunFam Sucrose transport protein 9 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00875 Lapu-Chr4 22885190 22890893 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00875 7 496 Sucrose Transporter Gene Family AT1G22710 62.374 0.0 628
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00875 K15378 - gmx:100785899 818.15