Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00874 ATGGAACCTTCTTCTTCCTCGCTTCAGGTGGAAACAGCAGAACGGCAACAACCTAGTCCACTCCGAAAAATGATTGCTGTCGCTTCCATGGCCGCAGGAATCCAATTTGGGTGGGCCCTGCAGCTCTCTCTCTTGACACCTTACGTTCAAACTTTGGGGGTCCCTCACGCGTGGTCCTCCTTCATCTGGCTCTGTGGCCCCGTCTCTGGGTTGGTTGTTCAGCCCATTGTAGGGTACAGCAGCGATCGATGCACTTCCCGTTTTGGTCGCCGCCGTCCATTCATTCTGTGCGGGGCGGTTGCTGTTGCGATCGCCGTGTTTTTCATCGGCTATGCGGCGGATATAGGACACGCAACAGGCGATGATATAACCAAAAAAACCCGTCCACGAGCTGTGGCCATATTCGTGATTGGGTTCTGGATCCTGGATGTTGCCAATAACATGCTTCAGGGCCCATGCCGTGCTTTTCTCGGCGATCTTGCCGCCGGTGACCAGAGAAAAACGAGAACAGCCAACGCCTTTTATTCGTTCTTCATGGCCATAGGCAACGTTCTCGGTTACGCCGCTGGCTCCTATGACAAACTCTACCACCTTTTCCGGTTCACACAGACTCAGGCGTGTGACGTGTTCTGTGCCAACTTGAAAAGTTGTTTTTTCTTTTCAATAATTATTCTCTTTATCCTTTGTGCCATTGTTCTCACTTGCGTGGACGATCCACCGTACACACCACATTCTGACAACACTAACAACAACGAACACCAGGACGTTCAAACTGCAAAATGGTATTCATGTTTTGGTGAATTAGGTGATGCGTTTAAGGGATTACAAAAGCCAATGTTGATGTTGATGCTTGTGACTGCTATCAACTGGGTGGCATGGTTCCCTTATGTGTTGTTCGACACTGATTGGATGGGCCGAGAGGTGTACGGTGGTACGGTGGGACATTCCGAGTACGATGCTGGCGTGCGTGTAGGTTCGTTGGGGCTCTTGTTGAATTCGGTGGTTTTGGCTTTGGTGTCGCTGGTGGTAGAACCTTTGGGTCGTGTTGTTGGAGGAGTTAAGTGGCTATGGGGAATCTTTAACGTTATCCTTGCCGTTTGCATGGCGATGACAGTAGTTATCACAAAGGCTGCACGCCACGAACGGAGTCATGACGGAGTTCTCGCTGGTCATCCTTCTCTGGGTGTTAAAGTTAGTTACAGTGTTCCATTTGCTCTGGCATCTATATACTCCAGCACTTCAGGTGCAGGCCAAGGTCTATCTTTGGGTGTTCTCAATGTTGCAATTGTTGTGCCCCAGATGATAGTGTCAGCAATAAGTGGACCATGGGATTCTTGGTTTGGTGGTGGTAACTTGCCGGCGTTCATGTTGGGTGCGGTGGCCGCAGCTGTGAGTGCGGTGTTAGCGGTTGTTCTGCTGCCAACTCCAAAGCAAGCAGATGGGGCCAAAGCTTCTTCCGTCACCGTAGGGAGTTTCCATTAG 1482 0.5054 MEPSSSSLQVETAERQQPSPLRKMIAVASMAAGIQFGWALQLSLLTPYVQTLGVPHAWSSFIWLCGPVSGLVVQPIVGYSSDRCTSRFGRRRPFILCGAVAVAIAVFFIGYAADIGHATGDDITKKTRPRAVAIFVIGFWILDVANNMLQGPCRAFLGDLAAGDQRKTRTANAFYSFFMAIGNVLGYAAGSYDKLYHLFRFTQTQACDVFCANLKSCFFFSIIILFILCAIVLTCVDDPPYTPHSDNTNNNEHQDVQTAKWYSCFGELGDAFKGLQKPMLMLMLVTAINWVAWFPYVLFDTDWMGREVYGGTVGHSEYDAGVRVGSLGLLLNSVVLALVSLVVEPLGRVVGGVKWLWGIFNVILAVCMAMTVVITKAARHERSHDGVLAGHPSLGVKVSYSVPFALASIYSSTSGAGQGLSLGVLNVAIVVPQMIVSAISGPWDSWFGGGNLPAFMLGAVAAAVSAVLAVVLLPTPKQADGAKASSVTVGSFH* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00874 493 PANTHER SUGAR TRANSPORTER 20 472 - -
Lapu4g00874 493 CDD MFS_SLC45_SUC 24 457 - -
Lapu4g00874 493 NCBIfam sucrose/proton symporter 20 478 IPR005989 GO:0005886|GO:0008515|GO:0015770
Lapu4g00874 493 Pfam MFS/sugar transport protein 27 292 - -
Lapu4g00874 493 Gene3D MFS general substrate transporter like domains 16 473 IPR036259 -
Lapu4g00874 493 SUPERFAMILY MFS general substrate transporter 22 478 IPR036259 -
Lapu4g00874 493 FunFam Sucrose transporter SUC2 22 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00874 Lapu-Chr4 22835647 22838160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00874 5 493 Sucrose Transporter Gene Family AT1G22710 59.491 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00874 K15378 - gmx:100782007 759.214