Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00852 ATGGAGATGAGAAGCATTGAAGATATAGAGATAGGAAGAGACATAACTCCAACACTCACTCCTCTCTCTTTCTCTCTCCACAATTCCACTCTCCACACTCACTGCTCCGCCTGTTTCTCTCCTGTTCCCAGCCCTTTTCCTCCATCTCTTCCCTTTCCCAATCCCCTCTTCTACTGCTCCCCTCCCTGCTCCGCTGCCCTTTCCCCTCTCCACCACTCCTCCGCCGAGACCCACCTCTCTCCCTCCGCCGATTCCTCCAACCTCCGCGCCGCCCTCCGCCTCCTCTCCTCCCACCGCCCCTCCCCCTCCCTCCGCCTCGCCGGCCTCCTCTCCAACCACCGCCTCCTCACCTCTCATCACGACGACCATGTCTCCGAGAGGATCAGGCTCGGTGCCACCGCCATGGCCGAAGCCATCGCCGAGCAGCGTGCCGTCCCGAACGACGACGTCGTTTTGGAGGAAGCCACGATTGCGTTATGCGCGGTGCTAACGAACGCCGTGGAGGTGCACGATAACGAAGGGCGCGCCCTCGGAATCGCGGTTTTTGATCCCACCTTCTCTTGGATCAACCACAGCTGTTCCCCTAATGCATGCTACCGTTTCCTCCTCTCACCTTCCTCTTCTCATTCCGATGAACCTGAACTTCTTCGCATTGCTTCACATCCACAAATGGGTAGTGGTGGGGTTTGTGTTAGCAGTGATGAATTTGCTAAAGAGGTGCTGGGTTATGGCCCTAGATTGGTTGTGAGGAGTATCAGGAAAATTAAAAAGGGAGAAGAGGTTACTGTAGCCTATACAGATATCTTGCAGCCCAAGGCAATAAGACAGTGGGAGCTATGGTCAAAGTATAGGTTTGTTTGTTGTTGCAAACGATGTAGTGCTCTTCCTTTTTCATACGTTGACCATGCATTGCAAGAAATTTCAGCTTTCAGTTATGATTCAACGGGTTCATATTCCAAGTTCCACAAAGACATGGCCGATACAAGATTGACTGAGTGCATTGATGATGTCATATCAGAGTATCTTTCGGATGGTGATTCTGAGTCTTGTTGTGGCAAGCTTGAGAAGATACTCACGCAAGGTCTGAATGAGCGGTTAGAAGACATTAAAGGAAAATCAGATTCTAAATTCATGCTGCATCCCCTAAACCACCACTCTTTAAAAGCCTACACAATACTGGCTTCAGCGTATAAAGTTTGTGCGAGTGATTTATTGTCTGTAGATTCTGAAATAGATATAAACCAGTTAAAGGCTTTTGACATGAGCAGGACCAGTGCTGCATATTCTCTGTTACTTGCAGGTGCAACTCACCATCTCTTCAATTCTGAATCCTCACTGATTGCATCTGTTGCAAATTTTTGGATAGGAGCTGGTGAATCTTTGTTATTCCTAAGCAGAAGTTCTGGATGGAGTATGTGTGTTAATTTGGGTCTGATTGTTCAAAACCTTACTTCAGCCATTAAATTCAAATTCTCGAAGTGTTCATTAATTGATAGGGTTAGAACCTGTATATCAACTGGTCAAATTAACAGTGCAGATTTTGAGAATGTATCAAATGAATTTATTTATTGTGTCTCAGATATTACACAGAAAGTTTGGGGTTTCCTTATCTCTGATTGCACTTTTTTGAGATCATGTAAAGATCCTATCAATTTCAGTTGGCTAATGTCTACCAAAAGTTCCAGTACAATGGATGTTGAGGTTTGCGTTAACAAAAGTTACACAACTGACATCTGTTACACTAATGAACCTGAAAACAGCATCTATATTTCTGAAGAACCAACCTCCACTGATGATGTAGTAGCATTCATTTCACAGCTTGGTTTACACTGCTTAGCTTATGGGGGATTGTTGGTCAGTATTTGCTATGGTCCCCATTCCCACGAGGTTTGTCATGTTCAAAATGTTCTAGACCGTGAAAAGAATTCTGTATTATATTCTGGTGAAGAATCTTGA 1956 0.455 MEMRSIEDIEIGRDITPTLTPLSFSLHNSTLHTHCSACFSPVPSPFPPSLPFPNPLFYCSPPCSAALSPLHHSSAETHLSPSADSSNLRAALRLLSSHRPSPSLRLAGLLSNHRLLTSHHDDHVSERIRLGATAMAEAIAEQRAVPNDDVVLEEATIALCAVLTNAVEVHDNEGRALGIAVFDPTFSWINHSCSPNACYRFLLSPSSSHSDEPELLRIASHPQMGSGGVCVSSDEFAKEVLGYGPRLVVRSIRKIKKGEEVTVAYTDILQPKAIRQWELWSKYRFVCCCKRCSALPFSYVDHALQEISAFSYDSTGSYSKFHKDMADTRLTECIDDVISEYLSDGDSESCCGKLEKILTQGLNERLEDIKGKSDSKFMLHPLNHHSLKAYTILASAYKVCASDLLSVDSEIDINQLKAFDMSRTSAAYSLLLAGATHHLFNSESSLIASVANFWIGAGESLLFLSRSSGWSMCVNLGLIVQNLTSAIKFKFSKCSLIDRVRTCISTGQINSADFENVSNEFIYCVSDITQKVWGFLISDCTFLRSCKDPINFSWLMSTKSSSTMDVEVCVNKSYTTDICYTNEPENSIYISEEPTSTDDVVAFISQLGLHCLAYGGLLVSICYGPHSHEVCHVQNVLDREKNSVLYSGEES* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00852 651 Pfam SET domain 184 265 IPR001214 GO:0005515
Lapu4g00852 651 Gene3D - 34 82 - -
Lapu4g00852 651 Coils Coil 651 651 - -
Lapu4g00852 651 Gene3D SET domain 8 292 IPR046341 -
Lapu4g00852 651 Gene3D - 83 166 - -
Lapu4g00852 651 PANTHER PROTEIN SET DOMAIN GROUP 41 1 643 - -
Lapu4g00852 651 CDD SET_SMYD 143 292 - -
Lapu4g00852 651 SUPERFAMILY SET domain 161 293 IPR046341 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lapu4g00852 SET 2.2e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00852 - - gmx:100775193 937.562