Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00844 ATGGAAGGGAATTTGTCTCAGGGAGGTATGGTTCAAGGGGGGAGTTCTTTTGGTGGTTTTGATTTGCCTGGATCAATGCGGGTTCATAGGCAAGGGCATCATCCTCATTCCATGAATCAACATCAAACTCATCCTTGCCAAGGGCCTTCAGTGCATTCCTCAGTTCATGATGGTTTTCCTCTTACAATGGGAACCTTGCAGAACTGCGATCAGACAATGCCAATGACTGAGTTTAGTCAGGGAGATAGAAACAAGAACTCACCAAGTGATGAAAGTTTTGCTGAGGAAGGTGTTGATGGTCATCATGAAGGAGGTAGAGGGAAAAAGGGGTCGCCCTGGCAGCGGGTGAAGTGGACTGATAAGATGGTGAGGCTTCTAATAACGGCTGTCTCTTACATAGGTGAGGATGCAACATCTGACTGTGGTGGCGCAAGGAGAAAATTTATAGTCCTACAGAAAAAGGGGAAGTGGAAATCAGTTTCCAAGGTCATGGCTGAAAGAGGTTATCGTGTTTCACCTCAGCAGTGTGAGGATAAATTCAATGATCTTAATAAAAGGTACAAAAAGCTTAATGATATGCTAGGCCGGGGAACGTCTTGTCAGGTTGTTGAGAATCCTTCTCTGTTGGATGTGATAGATTATCTTTCTGAGAAAGAAAAAGATGAGGTTCGCAAAATATTGAGCTCAAAACACCTGTTCTATGAAGAGATGTGTTCTTACCATAATTGTAACAGGTTGCATTTACCCCATGATCTGGAATTGCAACGATCACTGCAGTTGGCTCATAGAAATAGAGATGATAATGACAGTGACGATATCAGAAGGTCTCATCACGATGATCATGATGAAGATGATCTTGAAATGGAAACTGATGATCATGATGACTTTGAGGAGAATTATGCTTCTCATGCAGATAGTAGAGGAGTGTATGGGGAAGCAGGGCGACCTATGAAGAGATTGAAACCAGGGCAAGGACAAGAAGATGCTGCTACTTTTGGTGGTGCTTTAAATAGCCAAGAGTACAACAAAAGTTCATATCCTCATATGGTTCAATCTAATGTTAATCAAGCTGCACCTGAAAAAATGAGTGCAGCTTGGTTACAGAAGAAATGGGTTGAATCTCGTTCACTTCAGTTAGAAGAGCAGAAACTACAAATTCAGGTTGAGATGTTGGAGCTGGAGAAACAAAGATTCAAGTGGCAGAAGTTTAGTAAGAAAAAAGACAGGGAGTTGGAAAAGCTGAAGCTGGAGAATGAAAGAATGAAGCTCGAGAATGAACGTATTGCTTTAGAGCTAAAACGAAAGGGAAAGGGAGTGGGTGCTGACTTTAACTAG 1335 0.4217 MEGNLSQGGMVQGGSSFGGFDLPGSMRVHRQGHHPHSMNQHQTHPCQGPSVHSSVHDGFPLTMGTLQNCDQTMPMTEFSQGDRNKNSPSDESFAEEGVDGHHEGGRGKKGSPWQRVKWTDKMVRLLITAVSYIGEDATSDCGGARRKFIVLQKKGKWKSVSKVMAERGYRVSPQQCEDKFNDLNKRYKKLNDMLGRGTSCQVVENPSLLDVIDYLSEKEKDEVRKILSSKHLFYEEMCSYHNCNRLHLPHDLELQRSLQLAHRNRDDNDSDDIRRSHHDDHDEDDLEMETDDHDDFEENYASHADSRGVYGEAGRPMKRLKPGQGQEDAATFGGALNSQEYNKSSYPHMVQSNVNQAAPEKMSAAWLQKKWVESRSLQLEEQKLQIQVEMLELEKQRFKWQKFSKKKDRELEKLKLENERMKLENERIALELKRKGKGVGADFN* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00844 444 MobiDBLite consensus disorder prediction 74 113 - -
Lapu4g00844 444 Coils Coil 374 396 - -
Lapu4g00844 444 Gene3D - 118 189 - -
Lapu4g00844 444 MobiDBLite consensus disorder prediction 263 328 - -
Lapu4g00844 444 Coils Coil 404 433 - -
Lapu4g00844 444 MobiDBLite consensus disorder prediction 1 54 - -
Lapu4g00844 444 PANTHER F16F4.11 PROTEIN-RELATED 1 437 - -
Lapu4g00844 444 Pfam Myb/SANT-like DNA-binding domain 115 240 IPR044822 -
Lapu4g00844 444 MobiDBLite consensus disorder prediction 88 113 - -
Lapu4g00844 444 MobiDBLite consensus disorder prediction 263 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00844 Lapu-Chr4 21174933 21185615 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lapu4g00844 Myb_DNA-bind_4 6.3e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00844 - - gmx:100812134 645.966