Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00841 ATGGACCACAGTGCCGATGCACATCGCACGGACTTGATGACCATAACGCGCTTCGTGCTGAACGAGCAATCCAAGCACCCCGAGTCACGCGGCGATTTCACCATCCTTCTCAGTCACATTGTTCTCGGTTGCAAGTTCGTTTGCACCGCGGTTAACAAGGCTGGACTTGCTAAGCTTATTGGACTCGCTGGAGAGACCAATGTTCAGGGTGAAGAACAGAAGAAACTAGATGTTCTTTCTAATGAGGTTTTCATGAAGGCTCTCGTAAGCAGTGGCCGAACATGCATCTTAGTTTCTGAAGAAGACGAAGACGCGATAATTGTGGAGCCTTCTAAGCGTGGAAAGTACTGTGTTGTTTTTGACCCGTTGGATGGCTCGTCTAACATTGACTGTGGGGTTTCCATTGGCACAATTTTTGGAATTTATGCGTTGGCAGATGTCCATGAACCAACCGTAGAGGATGTTCTGCTTCCTGGGAAGAAAATGGTGGCAGCTGGTTATTGTATGTATGGAAGCTCTTGCACGTTTGTGTTAAGTACTGGAGCTGGTGTTAACGGTTTCACCCTTGACCCATCCCTTGGTGAATTCATACTAACTCACCCTAACATTAAGATCCCGAAGAAAGGAAAGATTTATTCAGTTAATGAAGGAAATGCCAAAAACTGGGATGGTCCTACTGCAGCTTACGTTGAAAAATGCAAGTTTCCAGAAGATGGTTCATCGCCAAAGTCTCTAAGATATATTGGAAGCATGGTAGCTGATATTCATCGTACATTGCTTTATGGAGGCATCTTTTTGTACCCTGGTGATCAGAAAAGTCCTAATGGAAAACTTCGTGTTCTGTATGAAGTCTTCCCAATGTCATTTTTGATGGAACAGGCAGGAGGACAGTCTTTTACAGGCAAAGAACGGAATCTTTACAACCGAACCAATCTAAAAAATAATCAAAAACAGTTTTCCTCTCGTGACCAATCTAAAACCGATAACCAATTAAAACCAGAATTTTTATCGATTTGGATGGATATTTTTATTAATTTTGTGATGGATTCGTTTTCTCTCTTTATAAAATGCAACCAAAGGAATTATGACAGTATAGTTTGA 1101 0.4214 MDHSADAHRTDLMTITRFVLNEQSKHPESRGDFTILLSHIVLGCKFVCTAVNKAGLAKLIGLAGETNVQGEEQKKLDVLSNEVFMKALVSSGRTCILVSEEDEDAIIVEPSKRGKYCVVFDPLDGSSNIDCGVSIGTIFGIYALADVHEPTVEDVLLPGKKMVAAGYCMYGSSCTFVLSTGAGVNGFTLDPSLGEFILTHPNIKIPKKGKIYSVNEGNAKNWDGPTAAYVEKCKFPEDGSSPKSLRYIGSMVADIHRTLLYGGIFLYPGDQKSPNGKLRVLYEVFPMSFLMEQAGGQSFTGKERNLYNRTNLKNNQKQFSSRDQSKTDNQLKPEFLSIWMDIFINFVMDSFSLFIKCNQRNYDSIV* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00841 366 Pfam Fructose-1-6-bisphosphatase, C-terminal domain 205 310 IPR044015 -
Lapu4g00841 366 PIRSF FBPtase_SBPase 9 319 IPR000146 GO:0005975|GO:0016791
Lapu4g00841 366 FunFam Fructose-1,6-bisphosphatase class 1 204 319 - -
Lapu4g00841 366 SUPERFAMILY Carbohydrate phosphatase 8 308 - -
Lapu4g00841 366 ProSitePatterns Fructose-1-6-bisphosphatase active site. 276 288 IPR020548 GO:0005975|GO:0042578
Lapu4g00841 366 PANTHER FRUCTOSE-1,6-BISPHOSPHATASE-RELATED 3 306 IPR000146 GO:0005975|GO:0016791
Lapu4g00841 366 PIRSF FBPtase 9 318 IPR028343 GO:0042132
Lapu4g00841 366 CDD FBPase 20 304 IPR000146 GO:0005975|GO:0016791
Lapu4g00841 366 Hamap Fructose-1,6-bisphosphatase class 1 [fbp]. 13 329 IPR000146 GO:0005975|GO:0016791
Lapu4g00841 366 Gene3D - 4 203 - -
Lapu4g00841 366 PRINTS Fructose-1,6-bisphosphatase signature 186 209 IPR028343 GO:0042132
Lapu4g00841 366 PRINTS Fructose-1,6-bisphosphatase signature 38 65 IPR028343 GO:0042132
Lapu4g00841 366 PRINTS Fructose-1,6-bisphosphatase signature 75 101 IPR028343 GO:0042132
Lapu4g00841 366 PRINTS Fructose-1,6-bisphosphatase signature 212 239 IPR028343 GO:0042132
Lapu4g00841 366 PRINTS Fructose-1,6-bisphosphatase signature 155 178 IPR028343 GO:0042132
Lapu4g00841 366 Pfam Fructose-1-6-bisphosphatase, N-terminal domain 13 201 IPR033391 -
Lapu4g00841 366 FunFam Fructose-1,6-bisphosphatase, cytosolic 4 203 - -
Lapu4g00841 366 Gene3D - 204 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00841 Lapu-Chr4 21098231 21104475 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Lapu4g00841 FBPase 7.1e-82 CL0171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00841 K03841 - gmx:100807451 592.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g00841 4 21098231 21104475 Lapu4g00841 4 21098231 21104475 ECH
Lapu4g00841 4 21098231 21104475 Lapu7g01956 7 35727393 35732699 PCT