Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00826 ATGTCATCAAATCAAGCATCCCTCAACCAAAGCAAGCTTTCCCTTCCAAACAATGACCTTGAGCAACATGCAACAACTCTTGAGATTGAAACTGAGGACAACTTTGACTACTCAAAAAGATCTCAATGGCTGCGTGCTGCTGTGTTGGGAGCCAACGATGGTTTGGTCTCAACAGCATCACTGATGATGGGTGTTGGAGCCGTTAAGCAAGATCTCAAGGCCATGATCCTATCAGGGTTTGCAGGGTTGGTGGCAGGAGCTTGTAGCATGGCCATAGGTGAATTTGTGTCTGTCTACTCACAACTTGACATCGAGGTTGCCCAAATGAAGAGAGACAAGGAAAGGATGCATGGTAGTGACAGAGAAGGGGAAGATGCCAATGATGAGAAAGAAAGTTTGCCAAATCCTTTACAGGCTGCAGCAGCCTCAGCTTTAGCCTTTTCTGTTGGTGCAATGGTGCCATTGCTTGCAGCCTCCTTTATAAGGGAATATAAGGTGAGGCTTGGGGTGGTTGTGGCTGCTGTGACCTTTGCTTTGGTGGTGTTTGGTTGGTTAGGAGCTGTGTTGGGTAAGGCTCCAGTGTTGAGGTCTGCTGTGAGGGTCTTGCTTGGGGGTTGGATGGCCATGGCGATTACTTTTGGTCTAACCAAGTTGATTGGTTCGAGTGGACTCTAG 675 0.48 MSSNQASLNQSKLSLPNNDLEQHATTLEIETEDNFDYSKRSQWLRAAVLGANDGLVSTASLMMGVGAVKQDLKAMILSGFAGLVAGACSMAIGEFVSVYSQLDIEVAQMKRDKERMHGSDREGEDANDEKESLPNPLQAAAASALAFSVGAMVPLLAASFIREYKVRLGVVVAAVTFALVVFGWLGAVLGKAPVLRSAVRVLLGGWMAMAITFGLTKLIGSSGL* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00826 224 CDD Nodulin-21 42 193 - -
Lapu4g00826 224 MobiDBLite consensus disorder prediction 111 131 - -
Lapu4g00826 224 Pfam VIT family 44 121 IPR008217 GO:0005384|GO:0030026
Lapu4g00826 224 Pfam VIT family 128 216 IPR008217 GO:0005384|GO:0030026
Lapu4g00826 224 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 20 219 IPR008217 GO:0005384|GO:0030026
Lapu4g00826 224 MobiDBLite consensus disorder prediction 111 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00826 Lapu-Chr4 20470683 20471626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00826 17 224 Nodulin-like Gene Family AT3G43660 70.192 8.45e-103 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00826 K22736 - gmx:100807991 345.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g00826 4 20470683 20471626 Lapu7g01960 7 35769860 35770874 PCT