Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00821 ATGGACCCGAAGTTCATCGGAAAGCCGCCGGCGACGGTGGACCTCGACCGGATGCCGGAGCGTGGGTCCCACCATCGGCGCTCCCACTCCGACACGTCGTTCCGCTTCGCCGCGAACTTCGACGACCTGCTTCTCTTTGACGCCTCCGACCTCGACATCTCCACGCTCCCCTCGCCGCTTCCTCTGCCTTCGCCGGGGGCCTCCGGCACCGTGCCGATAGCGGTAGACTCCGACGAGTCTGGCGGAAGGCCGAGGCCGACGGGGGCACCCGCCGGCGGGCACCTGAGGAGTCTGTCGGTGGGGTCCGATTTCTTTGACGGGCTCGGGTTCGCCGGCGGCGATGAGAGGGGCGGTGGAGGGAAGAGGGGCGGCGGCGAGCGAAGGGTGGGGCACCACCGGCACAGCAACTCCATGGACGGGTCCTCGACGACGTCGTTTGAGGCGGACTCGGCGATGATGATAGATGGAGTGAAGAAAGCTATGGCTCCTGATAAACTCGCTGAACTCGCTCTTATTGATCCCAAGAGAGCTAAGAGGATTCTTGCTAACAGGCAATCCGCCGCTAGATCAAAGGAGAGGAAGATTCGTTACACCAGTGAATTGGAGAGGAAGGTGCAGACACTTCAGACTGAAGCAACCAACCTTTCTGCACAGCTTACTATGCTTCAGAGAGACACCACAGATTTGACTGCAGAGAATAAGGAACTCAAACTGCGTCTAGAGGCTTTAGAACAAGAAGCACAGCTTAGAGAAGATCTCAATGAGGCATTGAAGGAAGAACTGCAGCGCCTTAGGGCACAGAGTACTCGTTTGGGTGCTATTGCAGGTAACCCTTCCTTTGGTGGGATATTCAACCAGTTGGCTTCCCAGTTAGCCATGCAACAGTTGAATAATTCTGCACCCCAGCAACCACAACACCAGCCACAGGTTGGCATGCCTCCTCCTCCCTCTGGACAGAACCACCCTAACTTCATGGACTTCAATCAGCAGAAGTAG 996 0.5753 MDPKFIGKPPATVDLDRMPERGSHHRRSHSDTSFRFAANFDDLLLFDASDLDISTLPSPLPLPSPGASGTVPIAVDSDESGGRPRPTGAPAGGHLRSLSVGSDFFDGLGFAGGDERGGGGKRGGGERRVGHHRHSNSMDGSSTTSFEADSAMMIDGVKKAMAPDKLAELALIDPKRAKRILANRQSAARSKERKIRYTSELERKVQTLQTEATNLSAQLTMLQRDTTDLTAENKELKLRLEALEQEAQLREDLNEALKEELQRLRAQSTRLGAIAGNPSFGGIFNQLASQLAMQQLNNSAPQQPQHQPQVGMPPPPSGQNHPNFMDFNQQK* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00821 331 Pfam bZIP transcription factor 175 233 IPR004827 GO:0003700|GO:0006355
Lapu4g00821 331 MobiDBLite consensus disorder prediction 1 32 - -
Lapu4g00821 331 SUPERFAMILY Leucine zipper domain 175 227 IPR046347 GO:0003700|GO:0006355
Lapu4g00821 331 MobiDBLite consensus disorder prediction 111 145 - -
Lapu4g00821 331 Coils Coil 198 274 - -
Lapu4g00821 331 SMART brlzneu 171 235 IPR004827 GO:0003700|GO:0006355
Lapu4g00821 331 Gene3D - 174 246 - -
Lapu4g00821 331 CDD bZIP_plant_RF2 176 225 IPR044759 GO:0003700|GO:0006355
Lapu4g00821 331 MobiDBLite consensus disorder prediction 294 331 - -
Lapu4g00821 331 MobiDBLite consensus disorder prediction 61 96 - -
Lapu4g00821 331 MobiDBLite consensus disorder prediction 14 32 - -
Lapu4g00821 331 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 173 236 IPR004827 GO:0003700|GO:0006355
Lapu4g00821 331 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 12 309 - -
Lapu4g00821 331 FunFam Transcription factor VIP1 174 227 - -
Lapu4g00821 331 MobiDBLite consensus disorder prediction 119 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00821 Lapu-Chr4 20257876 20262609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00821 9 330 bZIP Transcription Factor Family AT1G43700 47.414 3.54e-75 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lapu4g00821 bZIP_1 7.6e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00821 K20557 - gmx:778142 490.73