Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00765 ATGATGAACTCTAGTGATGGTCCTCTAAACCCCAGACCTAACACCTTGAGGTATAGAACTTTTATTATTCAAGGAAAAGTGTGGATCATATTCCAAAAAGATATGTTCATTACACTAGATAAACCCCTTCTCATCAATAGTTTTACCACCATCGATGGTCAAGGAGTTAATGTCCACATCACTAATAATGCATGTTTGATGATCTTTAAGGCCACCAACATAATCATCCATGGCATTCGAGTTCAACATTGCAAACCTGAAGCCTTAGGGATTGTAATGGGGCCTGAAGGAAAGGTGATTCATTTAGGTCATGTAGATGGGGATGCCATAAGATATTTTTATCGCTTCAAAGATTTGGATTGA 363 0.3802 MMNSSDGPLNPRPNTLRYRTFIIQGKVWIIFQKDMFITLDKPLLINSFTTIDGQGVNVHITNNACLMIFKATNIIIHGIRVQHCKPEALGIVMGPEGKVIHLGHVDGDAIRYFYRFKDLD* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00765 120 Gene3D - 2 114 IPR012334 -
Lapu4g00765 120 SUPERFAMILY Pectin lyase-like 3 113 IPR011050 -
Lapu4g00765 120 PANTHER PECTATE LYASE 18-RELATED 3 113 IPR045032 GO:0030570
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00765 Lapu-Chr4 18472672 18473815 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00765 1 111 Polysaccharide Lyase AT5G09280 53.153 5.21e-42 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00765 K01728 - gmx:100780437 177.948