Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00764 ATGAATGTAATTGATCAATGTTGGAGACCAAATCCTGAATGGAGGAGACACCGATCTCAACTAGCCACATGCTCTGTGGGTTATGCTGACAAGATGATAAACAACATTGGTAATGATCTTATTTACTATAAAGTTACAGACTCTAGTGATGATCCTATAAACCCTAAACCCAACACCTTGAGGTTACCAACATCATCATCCATGGCATTCGAGTTCATCATTGCAAACCTCAAGCCCCCAGAATTGTAA 249 0.3976 MNVIDQCWRPNPEWRRHRSQLATCSVGYADKMINNIGNDLIYYKVTDSSDDPINPKPNTLRLPTSSSMAFEFIIANLKPPEL* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00764 82 Gene3D - 1 71 IPR012334 -
Lapu4g00764 82 PANTHER PECTATE LYASE 18-RELATED 1 62 IPR045032 GO:0030570
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00764 Lapu-Chr4 18446052 18446565 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00764 2 61 Polysaccharide Lyase AT4G13210 49.180 1.08e-14 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00764 K01728 - gmx:100811216 108.997