Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00763 ATGTTGAAATATCATTTATCAACTGCTTCAAAGATTTGGATTGACCACAATACACTTTATGATTGTCAAGATGGTTTGCTTGACATAACACGAGGTTCTACTGGTGTGGCTATATCTAATAATTGGTTCAGAAACCAAGATAAGGTTATGCTTCTTGGACATGATGATGGATATCTAAGAGACCAGAACATGAAGGTTACCGTAGTGTACAATTATTTTGGACCTAATTGTAATCAACATATGCCAAGGATTCGTCATGGATATGCACATGTAGCCAACAATCTTTATCAAGGATGGCTTCAATATGCCATTGGTGGAAGCATGGACTTAGTCTCAAAAGTGAAGCTAACCTCTTTGTAG 360 0.3694 MLKYHLSTASKIWIDHNTLYDCQDGLLDITRGSTGVAISNNWFRNQDKVMLLGHDDGYLRDQNMKVTVVYNYFGPNCNQHMPRIRHGYAHVANNLYQGWLQYAIGGSMDLVSKVKLTSL* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00763 119 SUPERFAMILY Pectin lyase-like 6 109 IPR011050 -
Lapu4g00763 119 PRINTS Pollen allergen Amb family signature 102 119 IPR018082 -
Lapu4g00763 119 PRINTS Pollen allergen Amb family signature 80 99 IPR018082 -
Lapu4g00763 119 SMART amb_all 1 115 IPR002022 -
Lapu4g00763 119 Gene3D - 4 114 IPR012334 -
Lapu4g00763 119 Pfam Pectate lyase 11 105 IPR002022 -
Lapu4g00763 119 PANTHER PECTATE LYASE 18-RELATED 6 109 IPR045032 GO:0030570
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00763 Lapu-Chr4 18423199 18423870 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00763 6 108 Polysaccharide Lyase AT5G09280 80.583 1.60e-63 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00763 K01728 - gmx:100780437 204.527