Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00756 ATGACCAGCTCCTTCAAAATTAAACTGGGTGAAGGTAGTTTTGGTGTTGTATACAAAGGAGAGATACTCAGTGGTTGTCCTGTGGCTATAAAGAAATTGAATGCATCCAAAGGAAATGGCAGCAATAAAGCTCTCATTTATGAATTTATGTCTAATGGTTTTCTTGACAAGTTTATTTACCATAAGGGAATCAGAGCCATTCCATCCTTGAGTTGGGAAAATTTGTGGCAAATTGCCGAAGGGATAGCTCAAGGACTAGAATACTTGCACAAAGGATGCAACACTCGCATTTTACATTTTGACATAAAACCACATAACATACTTTTAGATGAAAATTATTGTCCCAAGATATCAGATTTTGAACTAGCAAAGCTTTGCCCCATGAAAGAGAGCACTATTTTCATGTCAGATGAAAGAGGAACAATAGGGTATAAAGCTCCAGAAGTGTGGAATAGACATCTAGGTGGAGTTTCCCACAAATCTGATGTATACAGTTATGGAATGATGCTGCTAGAAATTGTGGGAGGGAGAAAAAATATTAGTGCAGAAGCGAATCACACAAGTGAGATATATTTCCCACACTGGGCATACAACAGGCTAAAGCAGGGTGGAGAATTGAGACCTGATGAGGTGATGGCCACAGAAGAAAAGGAAATAGTAAGGAGAATGACTGTAGTGGGATTATGGTGTGTTCAAACGATTCCACATGATAGACCTACAATGAGTAGAGTAATAGAGATGCTAGAAGGCAAGGTAGATTCCTTGGAAATGCCTCCAAAACCTGATCTTTCTTCTTCCATTATTTGA 807 0.3879 MTSSFKIKLGEGSFGVVYKGEILSGCPVAIKKLNASKGNGSNKALIYEFMSNGFLDKFIYHKGIRAIPSLSWENLWQIAEGIAQGLEYLHKGCNTRILHFDIKPHNILLDENYCPKISDFELAKLCPMKESTIFMSDERGTIGYKAPEVWNRHLGGVSHKSDVYSYGMMLLEIVGGRKNISAEANHTSEIYFPHWAYNRLKQGGELRPDEVMATEEKEIVRRMTVVGLWCVQTIPHDRPTMSRVIEMLEGKVDSLEMPPKPDLSSSII* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00756 268 FunFam PR5-like receptor kinase 50 260 - -
Lapu4g00756 268 ProSitePatterns Serine/Threonine protein kinases active-site signature. 97 109 IPR008271 GO:0004672|GO:0006468
Lapu4g00756 268 SMART serkin_6 3 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g00756 268 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Lapu4g00756 268 ProSiteProfiles Protein kinase domain profile. 1 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g00756 268 SUPERFAMILY Protein kinase-like (PK-like) 8 249 IPR011009 -
Lapu4g00756 268 Gene3D Transferase(Phosphotransferase) domain 1 55 258 - -
Lapu4g00756 268 Pfam Protein kinase domain 42 246 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g00756 268 Gene3D Phosphorylase Kinase; domain 1 2 54 - -
Lapu4g00756 268 PANTHER RUST RESISTANCE KINASE LR10-RELATED 40 262 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00756 Lapu-Chr4 17774823 17775709 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00756 1 263 Receptor kinase-like Gene Family AT1G66910 48.299 2.17e-88 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Lapu4g00756 Pkinase 7.6e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00756 - - gmx:102665158 437.573