Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00722 ATGGCAAAGCAAGTGGCAGATAAAGAGTTTTACGTTGAATCATGCACGTACTTGCCCCCACAGGTGAATTCAGAGACACCATGGTTCACCAGAAATGGCATGCTTCCAGAAACTGCTTTACCAATGTTGCAGACGCAGATATGTATTATCTTTCTTGCAACCTTTTTCTTGCACATCATTCTGGGTCGTCTAGGAATCCCCAGATTCACTTCCATGAGCATTGTTGGCCTAATATTTGCAACCAGCTTCACTGAAGAATGGGCTCAGAAGTGCAGACAGTTGTTCTTTTTTGACTCTCAGGCAAATCTGGGGTTGCTTTCAGTGTTTGGCTACATGCTTTTCCTGTTCTACACAGGGGTTAAAACAGACGTGAGTGTGATCCACAGGACCAGAAGTAGTGCCGCCAACATAGGGTCTTTTGCCATAATGGCTCCCTTTATATGCAGCTTGGCTGTTGTGCATTTTCACTCCACAAAATACCTAGACCCTGATCAGGCAGCAAAAGTTCGAGTTATCTCTGGTGTGTTCTCTGTGACATCTTTCCCTAACGTTTGCGTAGTTTTAAGTGATCTCAAGATTCTGAATTCGGAGCTAGGTAGATTAAGCCAGTCCGCAGCTTTGGTTACTGAGCTGTTCAATGTGATGTTGATAACAACCCTTAATATCTCCAAAATTCTGTCTCAAGATCCATCAAGAGCCTGGTTTTGCCTCATAGTTGCAGTTTTGTTTGTGCTATTGGTTGTGTTCATCTATCGACCTGTCATGTTTTGGATCATAAAACAGACCCCAGAGGGTTCTCATGTTAGTGATCACTATGTGTATTTCATACTCACAATGGCTTTGTTGGCATCCTATGTCACACATCGCATTGGATTTTTGGCTCTCTTTGGCCCTTTTGTATTGGGCATGGCTACCCCAGAAGGGCCTCCATTAGGCACTGCCATAATTAAAAAGATTGACACTTTTGTTAACTGGATTTTGATGCCTCTTTTTGTGACTACATGTGTAATGAGGATGGACCTCATAGACTTCATGAATTGGAGATATGGAATGGATGGAGCAATTGACCAGTTCATGGTGCAAGCCCTGATTATTATTATAGTAACTACCGTTATCAAATTTGCTGTATGCATTGTGCTTGCTTTGTACAGCGAGATGCCATTGAATGATGCAGTCTCTCTCTCTTTGATTATGAATGGCAAGGGCGTAGTCGAATTGGCTGGATTCTCTATAGTTAGAGATGCCATGGGCATGCCAGACAACGTGATGGCATTGGTGATAATGTGCATAATTCTGAATGCTACAGTGATGCCAATGTTTCTGGCATACCTCTACGACCCCATGAAGAAATACGCAGGAAACTACACCAAGCGAAACATCTTCAGCCTCAGAAGCAACACCGAGCTTCGAGTGCTCACATGCATCCACAGACCCGACAACATTCCCCCTACCATCAACCTTCTGGAAGCCACCTTCCCCACCAAAGACAACCCTCTCTGCGTCTACGCCCTTCAGCTCATAGAACTCATCGGAAGATCATCCCCTCTCTTCATCTCTCACCAACTCCAATCCAAGAAAAAACACGACTCAACCACCTCCATGGCAGAAAAACTCGTTGATGCGTTCCAAAACTTCGAGCAAGAGTTCAAGGATGCACTGGTGGTGAACGCTTTCACATCAATCTCACCAACTGAGATGATGTATGATGACATTTGCACTTTGGCGTTGAACAAGTTCACCGCTCTCATTGTTCTTCCTTTTCATAAGAAGTGGTCTTCAGATGGGAACTGCATTGAGATAGAAGATGAGACTTTGAGAGAGTTAAACTTTCGTGTCATGCAGAGAGCTCCATGTTCAGTTGGGATATTGATTGAGAGAGTGCAAATGTCGCATATTTTCTCCCCCGAGACGCCTTACACTGTTTGCATGCTTTTCGTTGGAGGGAAAGATGATAGAGAAGCGCTTTTCTTTGCTAAGAGGATGACCAAGAATCCGCATGTTAGGCTCACTGTGGTTAGGTTTTTGGCTGCGAACAATGAGTCGGAGATACAGGATTTGCAGGAATTGCTTGACAGTGAGATTCTGAGTGATATCAAGGTGAACAAGAAGGTGGGTGAGGCTTATGTGAATTACATAGAGAAGAGGGTGAAGGACGGACCTGACACGGCTTTGGTGATTCGGAAGTTGGTGACTGAGTATGATTTGATCATTGTTGGAAGACAAGCAGGGATTGAAACTCCTCAAACTTCTGGATTGTTGCAGTGGAGTGAGTATCCAGAACTTGGGGTGCTTGGTGATTTGCTGGCTTCAACTGATGCTGCTGGCAAGGCTTCTGTGTTTGTGATGCAGCAACAAAGAACAGCCAGGGATACTTAA 2376 0.4436 MAKQVADKEFYVESCTYLPPQVNSETPWFTRNGMLPETALPMLQTQICIIFLATFFLHIILGRLGIPRFTSMSIVGLIFATSFTEEWAQKCRQLFFFDSQANLGLLSVFGYMLFLFYTGVKTDVSVIHRTRSSAANIGSFAIMAPFICSLAVVHFHSTKYLDPDQAAKVRVISGVFSVTSFPNVCVVLSDLKILNSELGRLSQSAALVTELFNVMLITTLNISKILSQDPSRAWFCLIVAVLFVLLVVFIYRPVMFWIIKQTPEGSHVSDHYVYFILTMALLASYVTHRIGFLALFGPFVLGMATPEGPPLGTAIIKKIDTFVNWILMPLFVTTCVMRMDLIDFMNWRYGMDGAIDQFMVQALIIIIVTTVIKFAVCIVLALYSEMPLNDAVSLSLIMNGKGVVELAGFSIVRDAMGMPDNVMALVIMCIILNATVMPMFLAYLYDPMKKYAGNYTKRNIFSLRSNTELRVLTCIHRPDNIPPTINLLEATFPTKDNPLCVYALQLIELIGRSSPLFISHQLQSKKKHDSTTSMAEKLVDAFQNFEQEFKDALVVNAFTSISPTEMMYDDICTLALNKFTALIVLPFHKKWSSDGNCIEIEDETLRELNFRVMQRAPCSVGILIERVQMSHIFSPETPYTVCMLFVGGKDDREALFFAKRMTKNPHVRLTVVRFLAANNESEIQDLQELLDSEILSDIKVNKKVGEAYVNYIEKRVKDGPDTALVIRKLVTEYDLIIVGRQAGIETPQTSGLLQWSEYPELGVLGDLLASTDAAGKASVFVMQQQRTARDT* 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00722 791 PANTHER CATION/H + ANTIPORTER 38 786 - -
Lapu4g00722 791 Gene3D - 42 453 IPR038770 -
Lapu4g00722 791 Pfam Sodium/hydrogen exchanger family 47 436 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00722 Lapu-Chr4 16107205 16110631 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00722 15 786 Antiporter Super Family AT5G22900 35.531 1.53e-164 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00722 K26731 - gmx:100785558 1240.33