Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00663 ATGAAGGTCTCGTTATCAACCTCATTCTCCGGCATACCATTATGGGCTTTGCTAGTGGCAGTTTCAATATTAGCATTCATTGTTGTGACGTGCGTCATCTTGTACTTTTGCTTCATATACTATCCTCGTAAAAGACCATACGAACCTCGTTTTTCTTTACCTAAATCAATAGCGTGCAAGCACCAAAATGGTGATTTTAGCTCTTACTCTCTTGATAAGAAGTTACTATCAGCATCAGGGAATGTCTCAGAACACAGTATGAACTTTGAGAAGTTATCATCAGGTTATTACAATCATGAGTTGTTCCTACATAGCCAGTTTTATCCAATGGCTAATGGCATCGCAGATGACCGGTATTTGGAAGGTTTGGGATCAAGAGGTAAGTTATGTTCCACAGTGAATGATAAGAGTAAGGGGTGGAAGTTTAGCCTTAAGGAGATAGAGGATGCTACTAATGGATTTACTAAAGAAAATGAGGTTGGAAGAGGAGATAATGGGATTGTTTATCTTGGTTTGTTATCAAGTAATAGACAGGTTGCAGTGAAGAGGCTAGTATGTAACAGTCACCAACCTGAGGAACTTTTTGCATCCCAAATGGAAGCAATTGGACGTGCAAAGCACACTAACCTGGTTCAATTACTTGGATATTGTGCTGAGGGTGCTTACAGGATGTCAGTATCTGAATATGTAGAACATGAAAGTCTGCACCACTGGCTTCATGAATTCCCTGTACAAATCAGCCCTCTAACCTGGGATATAAGAAAGAACATAATCTATGGTGTGGCAAAAGGACTGGCATACCTTCATGATGAAGTTAAACCAAAGATTCTCCATGGCAGCATAAAATCTAGCAATATTTTGTTGGACCACAAATGGAATCCAAAAATATCTGATTTAGGCCTTGTTAATGTTCTCAGTCCAAAAACAAGTCACGTTACACTGGAAGTGGAAGCATTGGGCTCCAGTTATGAAGCTACAGATTGTCATTCAAGTAGTACCTTAACTGAGGGTAATGACATTTATGATTTTGGATTACTTATTATGGAGATTGTATCTGGAAGAAACCCTTCATATAGCAGTCAGACACAGGTACAACTACCAATATTGGATTCATCGACTCATATAGTGGACTGGTTCAAATCAATGATTTCCAATAGGAAGATTGAGAATGTGATGGATCCAAAATTGCTTAAAATGCCTTCTTCCAAGGTACTTAAACGGGTTGCTTTGGTTGCTCTACGATGTGTAGATCCTGATATGAATCCTAGACTCAAGATGGGAGATGTGGTTAGCATGCTTGAAACCAACATTCTTCTTTTTGAGGAACGTGATATTGCCATGAAGACTTTAGAACGCAATCATTCTCCACAAAATCAGCAAAATTAG 1386 0.3896 MKVSLSTSFSGIPLWALLVAVSILAFIVVTCVILYFCFIYYPRKRPYEPRFSLPKSIACKHQNGDFSSYSLDKKLLSASGNVSEHSMNFEKLSSGYYNHELFLHSQFYPMANGIADDRYLEGLGSRGKLCSTVNDKSKGWKFSLKEIEDATNGFTKENEVGRGDNGIVYLGLLSSNRQVAVKRLVCNSHQPEELFASQMEAIGRAKHTNLVQLLGYCAEGAYRMSVSEYVEHESLHHWLHEFPVQISPLTWDIRKNIIYGVAKGLAYLHDEVKPKILHGSIKSSNILLDHKWNPKISDLGLVNVLSPKTSHVTLEVEALGSSYEATDCHSSSTLTEGNDIYDFGLLIMEIVSGRNPSYSSQTQVQLPILDSSTHIVDWFKSMISNRKIENVMDPKLLKMPSSKVLKRVALVALRCVDPDMNPRLKMGDVVSMLETNILLFEERDIAMKTLERNHSPQNQQN* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00663 461 Gene3D Phosphorylase Kinase; domain 1 124 229 - -
Lapu4g00663 461 ProSitePatterns Protein kinases ATP-binding region signature. 160 182 IPR017441 GO:0005524
Lapu4g00663 461 ProSiteProfiles Protein kinase domain profile. 154 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g00663 461 Gene3D Transferase(Phosphotransferase) domain 1 230 448 - -
Lapu4g00663 461 SUPERFAMILY Protein kinase-like (PK-like) 137 434 IPR011009 -
Lapu4g00663 461 FunFam Putative receptor-like serine/threonine-protein kinase 230 448 - -
Lapu4g00663 461 Pfam Protein kinase domain 154 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g00663 461 PANTHER OS01G0323000 PROTEIN 3 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00663 Lapu-Chr4 8300473 8303263 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00663 138 445 Trihelix Transcription Factor Family AT5G38560 35.238 2.75e-52 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Lapu4g00663 Pkinase 2.7e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00663 - - vra:106762086 757.673