Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00661 ATGGCGGTAGGACTCTCCGCCGCCATAACCTTGAAACCCCTCCTCCGCTTCAACCAACCTCACTTTCCCAAACCAATTCCAGCCACACTCCCTTTCTCTCCCTTGAGAATTTCCCACCACACAACCTTCCTGAAGACCCAAAAGTTGTCACCTTTCACTGTCTGTGTCCTCACCCAGGACCCTAAACAAAACACTCACATGGAAATTGAGGAGCAGGAACAACAACCACCTTCTCCTCCACAAGTCTTGTCGCCAAAGTTGGCGGAGAAATTGGCCAGAAAAGAGTCTGAGAGGTTCACCTACCTCGTTGCTGCTGTCATGTCCAGCTTTGGTGTCACATCCATGGCAGTGTTTGCTGTTTATTATAGATTCGCGTGGCAAATGGAGGGTGGAGAAGTGCCTTGGTCTGAAATGTTGGGCACATTTGCTCTGTCAGTGGGTGCTGCTGTGGGTATGGAGTTTTGGGCTAGATGGGCTCATAGGGCTCTCTGGCATGCTTCCTTGTGGCACATGCATGAGTCCCACCATCGACCAAGAGAAGGACCCTTCGAACTGAACGATGTATTTGCCATAATCAATGCTGTCCCTGCCATCGCTCTCCTTTCCTACGGTTTCTTTCACAAGGGACTCATCCCTGGCCTTTGCTTCGGTGCAGGTCTTGGAATTACTGTGTTTGGGATGGCCTACATGTTTGTACACGATGGCTTGGTTCATAAGAGATTCCCTGTGGGTCCCATTGCCAACGTGCCCTATTTCAGAAGAGTGGCTGCTGCTCACCAACTTCACCATTCTGAAAAATTTGATGGTGTACCTTATGGGCTGTTTATGGGACCAAAGGAAGTTGAAGAGGTGGCAGGGCTAGAAGAGCTGGAGAAAGAGATAAGTAGGAGAGCAAGATCATACAAAAAGAGTTCATGA 918 0.4935 MAVGLSAAITLKPLLRFNQPHFPKPIPATLPFSPLRISHHTTFLKTQKLSPFTVCVLTQDPKQNTHMEIEEQEQQPPSPPQVLSPKLAEKLARKESERFTYLVAAVMSSFGVTSMAVFAVYYRFAWQMEGGEVPWSEMLGTFALSVGAAVGMEFWARWAHRALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSYGFFHKGLIPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIANVPYFRRVAAAHQLHHSEKFDGVPYGLFMGPKEVEEVAGLEELEKEISRRARSYKKSS* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00661 305 Pfam Fatty acid hydroxylase 148 275 IPR006694 GO:0005506|GO:0008610|GO:0016491
Lapu4g00661 305 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 1 302 IPR045019 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00661 Lapu-Chr4 8287954 8290690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00661 1 218 Chloroplast and Mitochondria Gene Families AT4G25700 60.619 4.28e-92 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00661 K15746 - gmx:100785541 512.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g00661 4 8287954 8290690 Lapu7g02012 7 36349870 36352548 ECH
Lapu4g00661 4 8287954 8290690 Lapu4g00661 4 8287954 8290690 ECH
Lapu4g00661 4 8287954 8290690 Lapu7g02012 7 36349870 36352548 PCT