LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu4g00656	ATGGAGACTCAAAAGCTAATTATACATCTCATTCTTCTCCTTTGCATTGCTTGTTCATCCTCTTTCACTCCCATAGATAACTACCTTCTTAGCTGTGGATCACAGAACAATGCATCTCTCTTCAACCGCATCTTCACTGGAGATTCCACCAACCAAGGCTCAATTTTTCTCTCTGCTGACAAATCCATTTCCCTTGTCAACCAAAACCCTCCTCCAGATTTGCCCATTTTGTATCACACAGCAAGAGTTTTCCCCAGCACAGGAAGCTACAGGTTCAACATGAGGAAGCATGGCACCCACTTGGTTCGTTTTCATTTCTCACCTTTTAAGGCTCAAGAGTTTGATCTTAAATCTGCTAACTTCAGTGTCTTTGTTGACCGTAATTTGGTGCTTAGAAATTTAAGGCCAAGTAATGGTATGCTGCTTAAGGAGTTTATTCTGAAGATAGAGACAAATTGGCTTGAAATTGTGTTTAGACCTGAAGGTAATTCAGGTTTTGGCTTTGTCAATGCTATGGAGGTGTTTACTGCTCCTGTTGACTTTGTTATAGATTATGGAGCTAGGTTGGTGGGTCCTTTTGGTGTGGTAGAGTACAAGAACCTTTCATCTCAGGTTTTGGAAACTGTCCATAGGATTAATGTTGGGGGTGTGAAAGTAACCGCTTTTAATGACACCCTTTGGAGGACTTGGATTCCTGATGAGGAATTTCTGGTTTTTAAGGATGCTGCTAAGCCTGTGGTGAGCACTCACACACCAAATTACCAGAAAGGAGACGCCACTCGGGAGATCGCGCCAGATAGTGTTTATATGTCTGCTCAGGAAATGGATAAGGATCACGCCATTATAGCTTCACAGTTCAACATAACCTGGGATTTTCCAGTGGCTTCAGGTGGTGTTCGACACTTGGTTCGATTGCATTTCTGTGATATTGTTAGTCCTGCTCTTAATTTGCTCTACTTTGATGTGTATATCAACGGGTATTCTGCATACAAGGATCTGGATTTGTCATCTCTTACAGTCCATGTGCTTGCATCTCCGGTCTATGTGGATTTTGTTGCAGATTCTGATGATTCAGGTGTTATTCGAGTAAGTGTTGGCCCTTCTGAACTGAGCGGTTCTAGGGGGATGAATGCCATCTTGAATGGGGCAGAGATAATGCAGCTGGTGAATGTTGTGAACTCACGTGTTGTTCCTGGGAAGAAGAGGGTGTGGATATTGGTGGGTTCAATTGCAGGTGGTATTGTTGTTTTGCTTTTAGTTATATCTGCTTTTCTGCTTGCTCTCCAATGCAGGAAGAAGAAGAAGAAGAAGAAACCAAAGCAAAGGACGCTGGAAAGTGTAGGATGGACGCCTTTAGGTGTGTTTGGAGGGACTTCACTTAGTAGAATGTCTGAAGGGACAGCTTTTCCCTCTCCTGGTTCTTATGGTTATTTTGGATTGAGAATCCCTTTTTCTGATATACAATTAGCCACAAACAATTTTGATAGGAGTCTAATTATAGGATCTGGAGGATTTGGTATTGTTTACAAAGGAGTGCTCAAAGACAATGCGAAGGTTGCAGTCAAGAGAGGCATGCCTGGATCAAGACAAGGCCTTCCTGAATTCCAGACTGAAATCACAATCTTATCCAAAATTCGTCATCGCCATCTTGTTTCACTAGTTGGATATTGTGAAGAAAATTCAGAGATGATACTAGTCTATGAGTATGTGGAAAAAGGTCCACTCAAAAAGCATCTATATGGGTCAGCAGGACATACACCTTTGTCTTGGAAGCAGCGACTTGAGATATGCATTGGTGCAGCTAGAGGTCTCCACTATCTACACACCGGTTTTGCGCAAGGAATAATACACCGTGACATCAAATCAACCAATATTTTGCTGGATGAAAACTATGTCGCCAAGGTTGCTGATTTTGGTCTTTCAAGATCTGGACCTTGTCTCGATGAAACCCATGTGAGTACTGGTGTGAAAGGAAGTTTTGGTTATCTTGATCCGGAGTATTTCCGAAGGCAGCAGCTTACGGATAAGTCAGATGTTTACTCATTTGGGGTTGTGCTTTTTGAGGTTCTTTGTGCCAGACCTGCTGTTGATCCACAAACTGATAGGGAACAAGTGAACTTAGCCGAATGGGCACTTGAATGGCAGAAAAAAGGCAATCTGGAGCATATTATTGATCCTTATCTTGTAGGGAAGATAAAGCAAAGCTCACTGAAGAAATTTGGTGAAACAGCAGAGAAATGTTTGGCTGAATATGGTGTTGATAGGCCAACTATGGGTGCTGTATTGTGGAATTTGGAATATGCACTTCAGCTCCAAGAAAGTGAACAAGAAGAGGAGCCATATGAAGATAGCAGTGCTCAGGAAACAGTGAATGTGACGACTACAATAACCCCTGTGAGTCCTTCTAGCAACATAAGAAGAGAGGGAGATAATGATAATGGTTATTCAGACATAAGTGCTACTGAAGTTTTTTCTCAACTAATTAAGAGTGAAGGTAGATAG	2502	0.4201	METQKLIIHLILLLCIACSSSFTPIDNYLLSCGSQNNASLFNRIFTGDSTNQGSIFLSADKSISLVNQNPPPDLPILYHTARVFPSTGSYRFNMRKHGTHLVRFHFSPFKAQEFDLKSANFSVFVDRNLVLRNLRPSNGMLLKEFILKIETNWLEIVFRPEGNSGFGFVNAMEVFTAPVDFVIDYGARLVGPFGVVEYKNLSSQVLETVHRINVGGVKVTAFNDTLWRTWIPDEEFLVFKDAAKPVVSTHTPNYQKGDATREIAPDSVYMSAQEMDKDHAIIASQFNITWDFPVASGGVRHLVRLHFCDIVSPALNLLYFDVYINGYSAYKDLDLSSLTVHVLASPVYVDFVADSDDSGVIRVSVGPSELSGSRGMNAILNGAEIMQLVNVVNSRVVPGKKRVWILVGSIAGGIVVLLLVISAFLLALQCRKKKKKKKPKQRTLESVGWTPLGVFGGTSLSRMSEGTAFPSPGSYGYFGLRIPFSDIQLATNNFDRSLIIGSGGFGIVYKGVLKDNAKVAVKRGMPGSRQGLPEFQTEITILSKIRHRHLVSLVGYCEENSEMILVYEYVEKGPLKKHLYGSAGHTPLSWKQRLEICIGAARGLHYLHTGFAQGIIHRDIKSTNILLDENYVAKVADFGLSRSGPCLDETHVSTGVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPAVDPQTDREQVNLAEWALEWQKKGNLEHIIDPYLVGKIKQSSLKKFGETAEKCLAEYGVDRPTMGAVLWNLEYALQLQESEQEEEPYEDSSAQETVNVTTTITPVSPSSNIRREGDNDNGYSDISATEVFSQLIKSEGR*	834

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu4g00656	833	Pfam	Protein tyrosine and serine/threonine kinase	499	694	IPR001245	GO:0004672\|GO:0006468
	Lapu4g00656	833	PANTHER	OS07G0166700 PROTEIN	481	772	IPR045272	GO:0004714\|GO:0006468
	Lapu4g00656	833	SUPERFAMILY	Protein kinase-like (PK-like)	477	785	IPR011009	-
	Lapu4g00656	833	ProSitePatterns	Protein kinases ATP-binding region signature.	500	522	IPR017441	GO:0005524
	Lapu4g00656	833	MobiDBLite	consensus disorder prediction	785	817	-	-
	Lapu4g00656	833	MobiDBLite	consensus disorder prediction	774	817	-	-
	Lapu4g00656	833	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	615	627	IPR008271	GO:0004672\|GO:0006468
	Lapu4g00656	833	CDD	STKc_IRAK	500	766	-	-
	Lapu4g00656	833	FunFam	Putative receptor-like protein kinase	27	178	-	-
	Lapu4g00656	833	ProSiteProfiles	Protein kinase domain profile.	494	768	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu4g00656	833	FunFam	Receptor-like protein kinase FERONIA	205	390	-	-
	Lapu4g00656	833	Pfam	Malectin-like domain	30	387	IPR024788	-
	Lapu4g00656	833	Gene3D	-	27	180	-	-
	Lapu4g00656	833	Gene3D	-	205	389	-	-
	Lapu4g00656	833	Gene3D	Phosphorylase Kinase; domain 1	474	569	-	-
	Lapu4g00656	833	Gene3D	Transferase(Phosphotransferase) domain 1	570	794	-	-
	Lapu4g00656	833	FunFam	Receptor-like protein kinase FERONIA	570	783	-	-
	Lapu4g00656	833	SMART	serkin_6	494	768	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu4g00656	833	FunFam	receptor-like protein kinase FERONIA	462	569	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu4g00656	Lapu-Chr4	8216692	8219922	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu4g00656	2	833	Receptor kinase-like Gene Family	AT3G46290	49.531	0.0	761

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Lapu4g00656		Malectin_like	6.6e-31	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu4g00656	-		-	gmx:100814974	1419.06