Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00653 ATGTCATCGCCGGGGTTCACTGGGGGAGGTGGAGCATCAGAGTATTTTGCTGGAGCGGGTGGTTTCGCCGGCAGATCCATTTCTGCTGCCACCATGAACAACCCCAACGCCGCCGCGTCAGCCACCACAAACCTTCACCCTCTCTACCGAACCCAACAACAAAACCTTCCCGCAATGTTTCTAGATCCTGCCTCCCAGATCGTCCAACGCCAAACACCAACCCTCATCGGTAAACGCACCCTCACCGAATTTCAAACCTATAACCAAACCTATAATCAACCCAACAACAACCCAAACCATGTCCTCTCCAACCTCTTGCTTCGTTCTGTTAAGCCTCGAACCAGTTTCTCTCAGAGTTCTGTTGATAACTTTCCTGAATTGCATAACCATAACCCTTCCCTTTACCCTCAGCAGCGTTTTGGTGTTCCTTTACTTCACCAGCTTCGTCCCCAGCCCATTAATCTTCCCAGCAACGGTTCTGGACCCATGTTAAGCCCAAATTTGGGTTATCGGAACTCGAATTTGGGTCTACCACAGAACCGGGCTCGTCTTTCTGTTCCTCCTCCGGTTCAGGTGGCTGAGCCAGAGAAGAAGAACATGGATCATCGGCTTCTGGAATTGGAGAAGGAGCTTCTTGAAGACAACGACGAAGGAGAAGCTGATGCTGCTTCTGTGATAACCACCAGTGAGTGGTCTGAAACTTATCAGAATTTAATCAGTCCCGGTCCGGCGGTTCAGAAACCGGTTTCCACATCGCCGACTTCATCAACCACGTCGTCTACGTCTTCCTCTTCCTCCGTGGCTTCACCTGCCTCTGGATGCTCCAAGCAAACGCTTATGGAAGCCGCATCTGTAATTGTTGAAGGAAAACATGACGTGGCTATGGAGATCCTGAACCGGTTGAACGGTCCGAACCGGACTGATAGATTAACAGATTGCATGGTCTCGGCGTTGAAGTCGAGGATGAATCCGGTGGAATATCCGCCTCCAGTGATGGAGCTTTTTGGCCAGGAACATGCCGAGTCGACTCAGTTGATTCTGGAAAACTCCATGTGCTTTAAGGTAGGGTTAATGGCTGCCAATCTCGCAATTTTGGAAGCTGCATTTGAGGAGAAAACGGAGAACAGGTTCTGCGTGGTGGATTTTGAGATTGGACAGGGAAAGCAGTATCCGCATCTCCTCAACGCGCTCGCCGCGCGTGGTGGACAGAACGTCACGTTGAAGATCGTGGCAGTAGCTGAGAGCGGTCGTGAGGACAGGGTGCGTGCCGTCGGAGACATGCTGAGTCGACTAGCAGAAAGAAATAGGATCGGGCTTGAGTTCAAACTGGTAGCAACTCAGAAACTCACCGAGTTGACTCGTGAGTCACTCGGATGCAACGAGGATGAGATTATCATGGTGAATTTTGCGTTCAAACTTAGCAAAATTCCCGATGAGAGCGTCTCCACCGAGAATCCTCGTGACGAGCTTCTCCGGCGCGTGAAAGGACTCGCCCCGCGCGTGGTGACCATAGTAGAGCAGGAGATGAACGCGAACACAGCGCCGTTTTTGGCTCGCGTGGCAGAAACACTTTCGTTTTATGGTGCCTTGTTGGAGTCCATAGAAGCCACGACCCTTAGGGATAACAATAACAGCAACAATAGCTCTGACCGAGTCAAACTCGAGGAAGGACTGAGCCGGAAGTTGCATAACTCGGTGTCATGCGAAGGCAGAGATCGTGTAGAGCGTTGCGAAGTGTTTGGCAAATGGCGTGCGCGAATGAGCATGGCAGGGTTCAAGTTGAAGCCACTGGGTCAAAACATGGCCGAGTCAATAAAATCGCGACTCACTGCTGCTAACAACCGAGTCAACTCGGGACTGATCGTGAAGGAAGAGAACGGTGGGATTTGCGCTGGTTGGATGGGAAGAACACTCACGGTTGCATCTGCTTGGCGTTAA 1938 0.5134 MSSPGFTGGGGASEYFAGAGGFAGRSISAATMNNPNAAASATTNLHPLYRTQQQNLPAMFLDPASQIVQRQTPTLIGKRTLTEFQTYNQTYNQPNNNPNHVLSNLLLRSVKPRTSFSQSSVDNFPELHNHNPSLYPQQRFGVPLLHQLRPQPINLPSNGSGPMLSPNLGYRNSNLGLPQNRARLSVPPPVQVAEPEKKNMDHRLLELEKELLEDNDEGEADAASVITTSEWSETYQNLISPGPAVQKPVSTSPTSSTTSSTSSSSSVASPASGCSKQTLMEAASVIVEGKHDVAMEILNRLNGPNRTDRLTDCMVSALKSRMNPVEYPPPVMELFGQEHAESTQLILENSMCFKVGLMAANLAILEAAFEEKTENRFCVVDFEIGQGKQYPHLLNALAARGGQNVTLKIVAVAESGREDRVRAVGDMLSRLAERNRIGLEFKLVATQKLTELTRESLGCNEDEIIMVNFAFKLSKIPDESVSTENPRDELLRRVKGLAPRVVTIVEQEMNANTAPFLARVAETLSFYGALLESIEATTLRDNNNSNNSSDRVKLEEGLSRKLHNSVSCEGRDRVERCEVFGKWRARMSMAGFKLKPLGQNMAESIKSRLTAANNRVNSGLIVKEENGGICAGWMGRTLTVASAWR* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00653 645 MobiDBLite consensus disorder prediction 239 273 - -
Lapu4g00653 645 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 250 633 IPR005202 -
Lapu4g00653 645 ProSiteProfiles GRAS family profile. 258 645 IPR005202 -
Lapu4g00653 645 Coils Coil 197 217 - -
Lapu4g00653 645 Pfam GRAS domain family 276 645 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00653 Lapu-Chr4 8166293 8168703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00653 49 645 GRAS Transcription Factor Family AT5G52510 46.264 3.11e-143 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lapu4g00653 GRAS 1.2e-84 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00653 - - vun:114181888 1058.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g00653 4 8166293 8168703 Lapu4g00653 4 8166293 8168703 ECH
Lapu4g00653 4 8166293 8168703 Lapu7g02018 7 36399357 36401973 PCT