Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00646 ATGGCAGGTGAGGTGGTGAAGAAGGAAGAGACCCTCAATCTCAAGATCACTAACAAGAGTCATGTGCAACCTGAGGAGAAAATTGGGAGGAAAGAGTACCAGTTGGTCACTTTTGATCTTCCTTACTTGGCCTTCTACTACAACCAGAAGCTACTGTTCTACAAAGGGGAAGACTTTGATGGCATGGTTCAGAAGCTGAAGCTTGGACTTGGTGTAGTCCTGAAGGAGTTCCACCAACTAGCTGGAAAGTTAGGGAAAGATGAAGATGGGGTGTTTAGGGTTGAGTATGATGATGACATGCTTGGTGTGGAGGTTGTTGAAGCTGTTGCTGATGAGGTCGCTGTGGATGATCTTACTGTGGCTGAAACCACCAGCAATCTGATGGAACTCATACCTTATACTGGTATCTTGAATTTGGAAGGCATGCATAGACCCTTGCTTGCAGTTCAGTTAACGAAGCTGAAAGATGGGCTTGCAATGGGCCTAGCATTCAACCACGCTGTCTTGGATGGGACTGCCACGTGGCAATTCATGACGTCGTGGGCCGAGATTTGCAGCGGTTCACCCTCCACGTCAGCACCACCCTTCCTGGACCGGACCAAGGCCCGAAACACGCGAGTGAAGCTGGACCTCTCACTGCCCGAGCCCAACGGCCAGCCAGCTTCCAACGGCGAGGCAAAGCCCACTCCTACTCTTAGGGAAAGGATATTCAAATTCTCGGAGTCAAAGATCGACAAGATCAAGTCAACGGTCAACGAGAAGCCTCCATCGGACGGGTCAAAACCGTTCTCAACATTTCAGGCTCTTTCCTCCCATATTTGGCGCCATGTAAGCCATGCACGTAACTTGAAGCCGGAGGACTACACCGTGTTCACCGTCTTTGCTGACTGCCGGAAGAGGGTTGACCCACCGATGCCGGAGAATTATTTCGGAAACCTAATTCAGGCTATATTTACCGTTACGGCGGCCGGGCTTTTATCGGCTCATCCACCAGAATTTGGAGCTTCATTGGTGCAGAAAGCCATTGAAGGACATAATGCAAAGGCTATTGATGAACGTAACAAGGAGTGGGAGAGTGCACCAAAAATTTTCCAGTTCAAAGATGCTGGAGTGAATTGTGTGGCAGTGGGAAGCTCCCCAAGATTCAAGGTTTATGACATTGATTTTGGGTGGGGTAAGCCAGAGAATGTGAGGAGTGGAACCAATAACAAGTTTGATGGCATGATTTATTTGTATCCAGGGAAGATTGGAGGGAGGAGCATTGATGTGGAACTAACCTTGGAGCCTGAAGCCATGGGGAGGTTGGAGCAAGATAAGGATTTTCTTTTGGAAGCATAA 1338 0.4873 MAGEVVKKEETLNLKITNKSHVQPEEKIGRKEYQLVTFDLPYLAFYYNQKLLFYKGEDFDGMVQKLKLGLGVVLKEFHQLAGKLGKDEDGVFRVEYDDDMLGVEVVEAVADEVAVDDLTVAETTSNLMELIPYTGILNLEGMHRPLLAVQLTKLKDGLAMGLAFNHAVLDGTATWQFMTSWAEICSGSPSTSAPPFLDRTKARNTRVKLDLSLPEPNGQPASNGEAKPTPTLRERIFKFSESKIDKIKSTVNEKPPSDGSKPFSTFQALSSHIWRHVSHARNLKPEDYTVFTVFADCRKRVDPPMPENYFGNLIQAIFTVTAAGLLSAHPPEFGASLVQKAIEGHNAKAIDERNKEWESAPKIFQFKDAGVNCVAVGSSPRFKVYDIDFGWGKPENVRSGTNNKFDGMIYLYPGKIGGRSIDVELTLEPEAMGRLEQDKDFLLEA* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00646 445 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 16 442 - -
Lapu4g00646 445 Pfam Transferase family 14 441 - -
Lapu4g00646 445 Gene3D - 11 212 IPR023213 -
Lapu4g00646 445 Gene3D - 213 438 IPR023213 -
Lapu4g00646 445 FunFam Tryptamine hydroxycinnamoyl transferase 218 439 - -
Lapu4g00646 445 MobiDBLite consensus disorder prediction 211 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00646 Lapu-Chr4 7885336 7888522 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00646 64 444 Monolignol Biosynthesis Gene Families AT5G48930 27.723 2.41e-36 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00646 K19747 - gmx:100790669 813.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g00646 4 7885336 7888522 Lapu4g00646 4 7885336 7888522 ECH