Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00642 ATGGCACTGGCTCCTCCTCCAACAGTTGTCCTTGGTTCAGTAGCCTTTGCAATCTTTTGGGTTCTAGCAGTTTTCCCATGTGTGCCTTTTCTACCTATTGGTAGAACTGCAGGGTCCCTACTAGGTGCAATGCTTATGGTCATATTCCAAGTTCTTACTCCAGATCAAGCTTTTGCTGCAATTGATATACCAATTCTTGGTCTTCTTTTTGGTACAATGGTTGTCACTATTTTTCTTGAAAGAGCAGACATGTTCAAGTACTTGGGGAAGTTGCTGTCATGGAAAAGTAGAGGACCAAAAGACTTACTTTGTAGAATCTGTCTGATTTCTGCTATTTCAAGTGCTTTTTTCACCAATGACACCTCTTGTGTTGTACTGACTGAATTTGTGTTGAAAATTGCAAGGCAGCACAACCTGCCACCTTACCCTTTCCTTCTTGCACTTGCTTCAAGTGCTAATATTGGGTCCTCCGCAACCCCTATTGGGAACCCCCAGAATCTGGTTATAGCTATTCAGGGTAAAATATCATTTGGGAGTTTTCTAACTGGCATTCTTCCAGCTATGCTTGTAGGACTTGCAGTGAATGTTGTAAGTCTTATAGCCATATATTGGAGGGTATTAACTATTCATAAGGATGAAGAGGATCCAATTTCAGAAGTTGCAGAAGAGGAGATTATGTCCCATCAGTTTTCTCCAGCTATAATGGCTCATTGTGCGTCCTTTAATTCCGAAGAATGCAATGACAGTTCAGAACCAACTAATAATCTTCAAAACTCTTCTCAAGTTCACGTTAGGACAAACCAAACAGTGCCAAGTTTAAGTGAAGTTCAGATGGCTCTTAGTAGCACAAACGTAAAGGATTCCACAACAACCACAAATGCATCCAAGGAGGGGACCAATGATACAAAGGAGGAAACTAATCTTTCAAAAGATGTTGCAATAGTAGTAGATAAACCCATAGAAGCACGTCTTATGCACTCTTCAGAAGGAAAGGAGGACTATTTGAGCATAAAATGGAAAAGGATACTGTGGAAATCTTGTGTTTATATAATCACATTGATGATGTTGATTGCAATGCTTCTTGGTGTAAATATGGCATGGGCTGCAATTGCAGCTGCAATAATTTTGGTGGTGCTTGATTTCAAAGATGCAGGGCCTAGCATAGACAAGGTCTCTTATTCACTTTTGATATTCTTCTGTGGAATGTTTATCACAATAGATGGCTTCAAGAAAACTGGAATTCCAAGTGCTCTGTGGGACTTAATGGAGCCTTATTCTAGAATAGATCATGCTACTGGAATAGCTACACTTGCTGTAGTTATACTTGTCCTATCAAATCTGGCTTCAAATGTACCAACTGTTCTGTTGCTTGGAGCAAGAGTTGCAGCCTCAGCTGCTGCAATTTCCAAAGAAGATGAGAAGAAAGCGTGGCTAATCCTAGCTTGGGTGAGCACTATAGCAGGAAACTTTTCACTATTAGGATCAGCTGCCAACTTGGTTGTGTGTGAACAAGCTCGTAGAGCTCCAAACATTGGATACACATTAACTTTTTGGACACATCTCAAATTTGGCCTTCCTTCAACTCTCATAGTCACTGCTATCGGATTGACACTCATAAAATGA 1623 0.4048 MALAPPPTVVLGSVAFAIFWVLAVFPCVPFLPIGRTAGSLLGAMLMVIFQVLTPDQAFAAIDIPILGLLFGTMVVTIFLERADMFKYLGKLLSWKSRGPKDLLCRICLISAISSAFFTNDTSCVVLTEFVLKIARQHNLPPYPFLLALASSANIGSSATPIGNPQNLVIAIQGKISFGSFLTGILPAMLVGLAVNVVSLIAIYWRVLTIHKDEEDPISEVAEEEIMSHQFSPAIMAHCASFNSEECNDSSEPTNNLQNSSQVHVRTNQTVPSLSEVQMALSSTNVKDSTTTTNASKEGTNDTKEETNLSKDVAIVVDKPIEARLMHSSEGKEDYLSIKWKRILWKSCVYIITLMMLIAMLLGVNMAWAAIAAAIILVVLDFKDAGPSIDKVSYSLLIFFCGMFITIDGFKKTGIPSALWDLMEPYSRIDHATGIATLAVVILVLSNLASNVPTVLLLGARVAASAAAISKEDEKKAWLILAWVSTIAGNFSLLGSAANLVVCEQARRAPNIGYTLTFWTHLKFGLPSTLIVTAIGLTLIK* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00642 540 CDD YbiR_permease 28 539 - -
Lapu4g00642 540 PANTHER TRANSPORTER ARSB-RELATED 1 539 - -
Lapu4g00642 540 MobiDBLite consensus disorder prediction 284 304 - -
Lapu4g00642 540 MobiDBLite consensus disorder prediction 245 264 - -
Lapu4g00642 540 Pfam Citrate transporter 28 487 IPR004680 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00642 Lapu-Chr4 7797275 7800475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00642 38 225 Antiporters AT3G19490 25.871 9.03e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00642 - - gmx:100792256 908.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g00642 4 7797275 7800475 Lapu4g00642 4 7797275 7800475 ECH