Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00641 ATGCCTACGTGGTGGGGGAAATCATCATCAAAAGAAACCAAGAAGAAAGCAAATAAGGAAAGTTTTATCAATACATTTCACCGAAAATTTAAACTCCCATCTGAAAGTAAATCAAGCAGTAGATCTGGAGTATCTCGTAGACGTTGCAATGACTCAATTTCTGAGAAAGGGGCTCAGTCTCCTCCTGAATCTAGATCTCCTTCACCTTCCAAAGTGGCAAGATGTCAAAGTTTTGCTGAAAGGCCTCATGCTCAGCCACTACCACTTCCTGGTTTGCATCCGTCAAATATAAGCCGAGCAGATTCTGAAATTAGCATATCAGCTAAATCAAGAATTGAAAAAAGCTCCAAACCATCGTTGTTTCCACTACCAAAACCGGCATGCATGCGTGGTAGGCTGAACCCTGCAGATTTGGATGGAGATCTGGTCACTGCTTCAGTCTCTAGTGAGAGCTCTGCTGACAGTGATGAGCCAGTGGACTCTCGCAATCGTAGTCCTTTGGCAACTGACTGTGAAAATGGGACTAGAACTGCTGCAGGCAGTCCTTCCAGCTCGATGCCCAAGGATCTATCATCTACTGTTTCCCAAATAAATTCAAGAGAAACCAAAAAACCGGCAAACATTCTGGGTAATCACATGTCTTCTACTTCACCAAAACGGAGGCCTTTAAGCAACCATGTTTCAAATTTGCAGATTCCTCCTCATGGTGCCTTTTGTAGTGCACCTGATAGTTCCAAATCAAGTCCATCAAGAAGTCCATTGAGAGTATTTGGCACAGAACAGGTGTTGAACTCTGCCTTTTGGGCCGGAAAGCCATATTCAGAGGTCAATTTAGGTGGATCTGGGCACTGCTCAAGTCCAGGTTCTGGTCACAATTCTGGACATAATTCAATGGGAGGGGACATGTCAGGACAGTTATTTTGGCAACCTAGCAGGGGTAGCCCCGAATATTCTCCTGTACCTAGTCCCAAAATGACTAGCCCTGGACCTAGCTCTAGAATTCAGAGTGGTGCCGTTACACCTATTCATCCTAGAGCTGGGGGAACACCCAATGAATCACAGACAGGACGGGTTGATGATGGAAAACAACAGAGTCATCGATTGCCCCTTCCTCCTTTAGCAGTGACCAATACTTTGCCTTTCTCTCATTCAAATTCTGCAGCAACCTCTCCATCTATGCCAAGAAGTCCAGGAAGAGCAGATAATCCAATAAGCCCTGGATCACGTTGGAAAAAGGGAAAACTGCTTGGCAGAGGCACATTTGGGCATGTCTTTGTTGGCTTTAATAAGGAAAGTGGTGAAATGTGTGCTATGAAAGAGGTGACTCTGTTTTCAGATGATGCCAAATCTAAAGAAAGTGCTAAGCAATTAATGCAGGAAATTACCTTGTTAAGTAGATTGCGGCATTCAAATATTGTGCAGTATTATGGTTCTGAAACAGTAGGTGACAAGCTTTACATATATCTAGAGTATGTCGCTGGAGGCTCCATATATAAACTTCTTCAAGAGTATGGACAATTTGGTGAACTAGCTATTCGTAGTTTTACTAAACAAATTTTGTCAGGACTTGCTTATTTACATGCTAAAAATACTGTCCACAGGGACATCAAAGGAGCAAATATACTGGTAGATACTAATGGTCGGGTTAAGTTGGCAGACTTTGGCATGGCAAAACATATAACAGGGCAATCATGTCCATTATCATTCAAGGGAAGCCCCTATTGGATGGCTCCTGAGGTTATAAAAAACTCCAATGGTTGCAACCTTGCTGTCGATATATGGAGCCTTGGATGCACTGTTTTGGAAATGGCTACGACTAAACCTCCTTGGAGTCAATATGAAGGGGTTGCTGCCATGTTCAAGATTGGTAATAGCAAGGAACTCCCAATAATACCGGATCATCTATCTAGTGAAGGAAAGGATTTTGTTAGGAAATGCCTACAACGGAATCCGCACAATCGCCCTCCAGCAAGTGAATTATTGGAGCACCCTTTTGTTAAACATGCTGCACCTTTGGAAAGGTCTATTCTGGGTCCTGATGCTTCTTCAGAACCAGCTGTATCTGGGATCACTCATGGAGCTACAGCTCTGGGTATTGGACAAGGAAGGAATCCTTCTACATTGGATTCTGATAGACTTTCCCGTCATTCTTCTAGGTTTTTGAAAACTAATCCTCATGCAAGTGAAATCCATATTCCGAGGAACATATCCTGCCCTGTCTCACCCATTGGAAGCCCACTTCTGAGACCAAGATCGCCACAACATATGAATGGGAGAATGTCTCCCTCTCCTATATCCAGCCCTCGGACTGCATCTGGTGCATCCACACCTCTCAACGGTGGTAGCGGTGCAATTCCATTTAGTAATCACTTAGTTTACATTCAGGAGGGTCTTGGAAACTTGCCGAAGTCCTCAAATGGTGTCTACATTAGTGGCCCTACTCATCATGACTTGAATGTTGATATTTTTCGAGGGATGCAACAGACGCATCACATTACAACAGAACTGGTTCCAAGTGAAAGTGATGTTCTGGGGAAGCAGTTTGCACGATCTCCTCGTAATGAGCCATATGATGTTCAATCAGTCTTGGCTGATCGCGTTTGTCGGCAGCTGCTGGGGGATAATGTGAAAATCAACCCATCCCTTGATCTAAATCCCAATTCTTTGCTCAGCCGGGCTAATGGTTTATGA 2691 0.4389 MPTWWGKSSSKETKKKANKESFINTFHRKFKLPSESKSSSRSGVSRRRCNDSISEKGAQSPPESRSPSPSKVARCQSFAERPHAQPLPLPGLHPSNISRADSEISISAKSRIEKSSKPSLFPLPKPACMRGRLNPADLDGDLVTASVSSESSADSDEPVDSRNRSPLATDCENGTRTAAGSPSSSMPKDLSSTVSQINSRETKKPANILGNHMSSTSPKRRPLSNHVSNLQIPPHGAFCSAPDSSKSSPSRSPLRVFGTEQVLNSAFWAGKPYSEVNLGGSGHCSSPGSGHNSGHNSMGGDMSGQLFWQPSRGSPEYSPVPSPKMTSPGPSSRIQSGAVTPIHPRAGGTPNESQTGRVDDGKQQSHRLPLPPLAVTNTLPFSHSNSAATSPSMPRSPGRADNPISPGSRWKKGKLLGRGTFGHVFVGFNKESGEMCAMKEVTLFSDDAKSKESAKQLMQEITLLSRLRHSNIVQYYGSETVGDKLYIYLEYVAGGSIYKLLQEYGQFGELAIRSFTKQILSGLAYLHAKNTVHRDIKGANILVDTNGRVKLADFGMAKHITGQSCPLSFKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPIIPDHLSSEGKDFVRKCLQRNPHNRPPASELLEHPFVKHAAPLERSILGPDASSEPAVSGITHGATALGIGQGRNPSTLDSDRLSRHSSRFLKTNPHASEIHIPRNISCPVSPIGSPLLRPRSPQHMNGRMSPSPISSPRTASGASTPLNGGSGAIPFSNHLVYIQEGLGNLPKSSNGVYISGPTHHDLNVDIFRGMQQTHHITTELVPSESDVLGKQFARSPRNEPYDVQSVLADRVCRQLLGDNVKINPSLDLNPNSLLSRANGL* 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00641 896 MobiDBLite consensus disorder prediction 283 312 - -
Lapu4g00641 896 MobiDBLite consensus disorder prediction 1 20 - -
Lapu4g00641 896 MobiDBLite consensus disorder prediction 98 114 - -
Lapu4g00641 896 MobiDBLite consensus disorder prediction 756 781 - -
Lapu4g00641 896 Gene3D Transferase(Phosphotransferase) domain 1 408 685 - -
Lapu4g00641 896 ProSiteProfiles Protein kinase domain profile. 410 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g00641 896 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 58 679 - -
Lapu4g00641 896 SUPERFAMILY Protein kinase-like (PK-like) 408 667 IPR011009 -
Lapu4g00641 896 MobiDBLite consensus disorder prediction 29 253 - -
Lapu4g00641 896 SMART serkin_6 410 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g00641 896 MobiDBLite consensus disorder prediction 283 411 - -
Lapu4g00641 896 FunFam Mitogen-activated protein kinase kinase kinase 408 689 - -
Lapu4g00641 896 MobiDBLite consensus disorder prediction 54 73 - -
Lapu4g00641 896 Pfam Protein kinase domain 411 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g00641 896 MobiDBLite consensus disorder prediction 377 396 - -
Lapu4g00641 896 MobiDBLite consensus disorder prediction 29 53 - -
Lapu4g00641 896 ProSitePatterns Protein kinases ATP-binding region signature. 416 439 IPR017441 GO:0005524
Lapu4g00641 896 MobiDBLite consensus disorder prediction 741 781 - -
Lapu4g00641 896 CDD STKc_MEKK1_plant 409 666 - -
Lapu4g00641 896 MobiDBLite consensus disorder prediction 166 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00641 Lapu-Chr4 7777066 7785639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00641 1 886 MAP Kinase Kinase Kinase AT1G63700 59.753 0.0 895
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lapu4g00641 Pkinase 2.8e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00641 K20717 - gmx:100819762 1575.07