Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00634 AACTTGTTAGCGAAGGAGTCAATGTCTACGCATCATAAAACAAGGAGAGACCAAATCCACAGCAAAACAAAAACACCAACACAAATTCTCCTTGATCTCTTTCTGTTTCATCAATCTCCTCTTCAATTCTTTCTTTCAAACTACGAACACAGAGCTCAGTGTTCACCAAAATCAATGGCCATTGTTGGTGTCGGTTTCCGTCCCACAGAACAAGAACTTGTAGAATTCTACCTCAAACACAAGTTGCTCGCTGATGATCCCCGTGTCCACGTCATCCCTGTCATTGATCTCTGCGATGTGGAACCTTCGGATGTTCCAGGTAATCTAAGAACCAAAATACTAAACAAACACCCCTTTGTCATTTTTATTCCTGTTATCTTTACAACACTGTTGTTTTGA 399 0.406 NLLAKESMSTHHKTRRDQIHSKTKTPTQILLDLFLFHQSPLQFFLSNYEHRAQCSPKSMAIVGVGFRPTEQELVEFYLKHKLLADDPRVHVIPVIDLCDVEPSDVPGNLRTKILNKHPFVIFIPVIFTTLLF* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00634 132 MobiDBLite consensus disorder prediction 1 21 - -
Lapu4g00634 132 SUPERFAMILY NAC domain 60 109 IPR036093 GO:0003677|GO:0006355
Lapu4g00634 132 Pfam No apical meristem (NAM) protein 62 110 IPR003441 GO:0003677|GO:0006355
Lapu4g00634 132 Gene3D NAC domain 69 124 IPR036093 GO:0003677|GO:0006355
Lapu4g00634 132 ProSiteProfiles NAC domain profile. 60 132 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00634 Lapu-Chr4 7479765 7481585 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00634 62 107 NAC Transcription Factor Family AT1G33060 50.000 5.02e-09 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lapu4g00634 NAM 1.6e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00634 - - vun:114167348 114.775