Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00633 ATGGAGATCATAGGATTCGGTTTCCGTCCCACAGAAGAAGAACTTGTCGACTATTACCTCAAACATAGGTTGCTCGGTGATGATCCAGGTGTCCACGTCATCCCCGACATTGACCTTTGTGAAGTGGAACCTTGGGAAGTACCAAAGTTATTAGCGGCATCAGATGTGCAATTCGATCTGCGAGAATGGGTTTTCTTCAGTCCTGTTGATTTCAAGTATTCAAATAGTAAAAGGTTTAACAGGACAACCAAGTGTGGCTTCTGGAAACCCACTGGAAAAGATCGTGACATTAGGAGCGTGGACACCAACACTCTCATTGCCACAAAGAAGACTCTTGTTTACTATAAAGGTCGTGTTTCCCGTGGTGTCAAGTCCAACTGGGTTATTCATGAATACCATGCTGTTACCTTTCACGAAAGCCAGAGGACCTCTGTTTTGTGTCGCTTGATGGAGAAACCTGGCAAAATAACTGAAGATGAAGGGGAGCCCAGTAGAAACATGGTTTCGGGCTATGAAAATCCGGCAATAGCTGGAGGAATATCTTCAAGAGGTACTTATACTAGAATAGAGACGCCCTTTCAGCCTGTCTTTCAAAGACAGAATTACTTCTTCCCACCACAACAGTCTCCAATTGGTATGGAGCTAGAAGGAGCGGCTTATCCAGATTCCCCATTCTACAATTCTCATTGTAGAAATGAATCCAATGTTAGTCAGATTCCATTCGAAACTAGCTGGGAAGAGAAATTCGTCAATTCTCTTTTTATACATGAGAACTTTGTCAACAATGAAGAAGTATAA 798 0.4273 MEIIGFGFRPTEEELVDYYLKHRLLGDDPGVHVIPDIDLCEVEPWEVPKLLAASDVQFDLREWVFFSPVDFKYSNSKRFNRTTKCGFWKPTGKDRDIRSVDTNTLIATKKTLVYYKGRVSRGVKSNWVIHEYHAVTFHESQRTSVLCRLMEKPGKITEDEGEPSRNMVSGYENPAIAGGISSRGTYTRIETPFQPVFQRQNYFFPPQQSPIGMELEGAAYPDSPFYNSHCRNESNVSQIPFETSWEEKFVNSLFIHENFVNNEEV* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00633 265 Gene3D NAC domain 11 156 IPR036093 GO:0003677|GO:0006355
Lapu4g00633 265 Pfam No apical meristem (NAM) protein 5 133 IPR003441 GO:0003677|GO:0006355
Lapu4g00633 265 ProSiteProfiles NAC domain profile. 2 152 IPR003441 GO:0003677|GO:0006355
Lapu4g00633 265 SUPERFAMILY NAC domain 4 152 IPR036093 GO:0003677|GO:0006355
Lapu4g00633 265 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 5 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00633 Lapu-Chr4 7475025 7476228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00633 4 153 NAC Transcription Factor Family AT4G35580 50.000 3.63e-43 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lapu4g00633 NAM 1.9e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00633 - - gmx:100779816 369.392