Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00632 ATGGAGATTGTAGGATTCGGTTTTCGTCCCACAGAAGAAGAACTTGTCAACTTTTACCTCAAACACAAGTTGCTCGGAGATGATCCCCGTGTCGACGTCATGACTGTCATAGATCTTCTCAAAGTGGAACCTTGGGAAATACCAGCGATGTTAGCTGAATCAGTAATACAATTCAAAGGCCCAGAATGGTTTTTCTTCAGTCGAGTTCATTTCAAGTACCAAAACAGTAAAATGAATGACCGGAAAACCGAGTGTGGCTCCTGGAAACCCACTGGAAAAGACCGTAAAGTTCGGACCTGGGCCACCAACACTGTCATTGGGACTAAGAAGACTCTTGTTTTCCAAAGTCCTTCCAAAGGTGTCCAGGCCAAGTGGGTTATTCACGAATATCACGCTGGTCCTGGTACCTTCAATGAAAACCAGAGGAATTTTGTTTTATGCCGCTTGATAAAGAAACCTGGGAAAACAACTGAAAAGGGAATTGGAGCACGGATCTCTGATGAAGGGGAATCCAGTGGAAGTACGGTTTCTGACTATGAAAATCAGGCAATGGCAGAAGGAGTTGCATCTGGAGGTACTTCTACGGGAATGGAAACATTCTGTCGGGCAACACCTCAGACAGAGAAATACACCTCCCCAGTAGAGCAGTCTCTAACTGATGTTGGGCAGGATGATGCATCTTTTCCAAACTATCCATTGAACAGTATCTGTTTTAGAAATGAAAACAACATTCACCAGGTTTCCTCCGAAACTACACAGGTTCCCTCCGAAACTACACAGGTTCCCTCCGAAACTACACAGGTTCCCTCCGAAACTACACAGGTTCCCTCCGAAACTACACAGGTTCCCTCCGAAACTACACAGGTTCCCTTTGAGGTTCCCTCCAAAACTACGCAGGTTCCCTCCGAAACTATGCAGGTTCCCTCCGAGTTTCCCTCTGAAACTACGCAGGTTCCCTCCAAAACTACACAGGTTTCCTCCGAGTTTCCCTCTGAAACTATGCAGGTTCCTTCCAAAACTACTAGTTCCCAAGTATTATTCTTTTCAATCATTTTAATTTCTTCCTCCATTGCCTTGATCAACTCTGATCCCAACTACCGTGGCCGCTTCCTCCTCCACCACTTCTCCGACGCCATGGGCCTCTCTGACCTCATCGTTCTCCCTCAGTCCTTCAGGTACTCCTCTCTCTTTCTCTGTTCAAAGATATTGAAAAAACTTTAA 1221 0.457 MEIVGFGFRPTEEELVNFYLKHKLLGDDPRVDVMTVIDLLKVEPWEIPAMLAESVIQFKGPEWFFFSRVHFKYQNSKMNDRKTECGSWKPTGKDRKVRTWATNTVIGTKKTLVFQSPSKGVQAKWVIHEYHAGPGTFNENQRNFVLCRLIKKPGKTTEKGIGARISDEGESSGSTVSDYENQAMAEGVASGGTSTGMETFCRATPQTEKYTSPVEQSLTDVGQDDASFPNYPLNSICFRNENNIHQVSSETTQVPSETTQVPSETTQVPSETTQVPSETTQVPSETTQVPFEVPSKTTQVPSETMQVPSEFPSETTQVPSKTTQVSSEFPSETMQVPSKTTSSQVLFFSIILISSSIALINSDPNYRGRFLLHHFSDAMGLSDLIVLPQSFRYSSLFLCSKILKKL* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00632 406 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 246 - -
Lapu4g00632 406 Pfam No apical meristem (NAM) protein 4 131 IPR003441 GO:0003677|GO:0006355
Lapu4g00632 406 SUPERFAMILY NAC domain 4 152 IPR036093 GO:0003677|GO:0006355
Lapu4g00632 406 Gene3D NAC domain 11 157 IPR036093 GO:0003677|GO:0006355
Lapu4g00632 406 MobiDBLite consensus disorder prediction 251 335 - -
Lapu4g00632 406 ProSiteProfiles NAC domain profile. 2 152 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00632 Lapu-Chr4 7458552 7464958 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00632 4 152 NAC Transcription Factor Family AT3G49530 42.857 1.17e-34 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lapu4g00632 NAM 3.6e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00632 - - vra:106778154 364.77