Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00607 TATGAGCTTTTGTTCACTAAGGTGAAGGCGTGGCTTACTGACAAGGATGCTGAAGCACTTAGGTGTCAGGAGCAATTGGTGGAGGAGGAAGAAGCTGCTCGGAAAAGACAAACTGAGATTTCGGAGAGGAAACGCCAGAAGAAGCTTAGACAAAAAGAACAGAAAGCTAGGGAACAAAGACACAAAGCTGAGGCAGAAATTGAAGGCAATATTGACAGTACTGTAAACGCTTCATCACTGGCAGAAGCATCTTTAGATACGTACAATTTTGAAGCTCGTAATCCAAATGAACTTTCTGATAACGTAACTTCACCTGTACCTCCCCGATATCTCGACAGCAAGGAAATAAATGTGGATACTCATTCAGAGTATGATACCATCGCTGATCAGAATCTTGAGAGATGGTCTGCACATGGACATATACATCACTGCCAAGCAGTTTCCACACAACAGGATCTGCCAAAATGGGAATTGGCTGAAGCCAATGATTTGCGTACAAACCAGATTTCTCCTCTGTCAAAGCTCGAAGTCAATCAGAAATATGGAGCCAACCATGAAAAAAAAGCATCAGCTATAGTCAGTGGTAGTAAAGTATGTAGTCCAAAGTCTAAAGCAGAAATTGATAAGGTGGTTTTAAAAACCACACAAGAGAAAGAACCGGACCAACTTAAGAAACAAGAAGTTATAATAGGATCTATACCTGTTAATCTTGACAATTGCGGACTATCAGAGGGTAATATGGTGCCTTCTCAAAAGGACTCTATGGTTGAGAAAGTGGGCAAGCAGGACAGTTTTCGGGATAAGCCAATGAAAACTGAAGATCAAGTTCCAGTTCAAAGTGGTGAGACAGAAGGTGATGCAGTTCATGGAAATGCAGAAGGTGATGTAAGGGAGGGTAGTACAGATGGCGATGATACTGAACATTTCTCCCGTCCAGAAGGTAGAGCGGATCCAGGAAGCTTCCAGTTCTCCATCCAGGAAGCAAAAGCTTTCCTTGCAAAAAGATGGAAAGAAGCTCTCTCATCAGATCATGTGGTATTGCATCTTACCTCTGAGTCAGAATCTTCTGATGAGGATTCTATAACGGCAGCGTCTCAATCTTCTGATGAGGATAGAGGCAACATTGTGGCAAATGCTGATAACAAATTGCCTGCAACCTCCACAGTTGCTAAATCCAAACCCAGATCGAAGAAGTCTGAAAAGAGAACCAAGATAAAGTATGTTCCCAAACAGAAGACAAATACTGATGTGAAAGAATAA 1260 0.4198 YELLFTKVKAWLTDKDAEALRCQEQLVEEEEAARKRQTEISERKRQKKLRQKEQKAREQRHKAEAEIEGNIDSTVNASSLAEASLDTYNFEARNPNELSDNVTSPVPPRYLDSKEINVDTHSEYDTIADQNLERWSAHGHIHHCQAVSTQQDLPKWELAEANDLRTNQISPLSKLEVNQKYGANHEKKASAIVSGSKVCSPKSKAEIDKVVLKTTQEKEPDQLKKQEVIIGSIPVNLDNCGLSEGNMVPSQKDSMVEKVGKQDSFRDKPMKTEDQVPVQSGETEGDAVHGNAEGDVREGSTDGDDTEHFSRPEGRADPGSFQFSIQEAKAFLAKRWKEALSSDHVVLHLTSESESSDEDSITAASQSSDEDRGNIVANADNKLPATSTVAKSKPRSKKSEKRTKIKYVPKQKTNTDVKE* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00607 419 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 8 414 - -
Lapu4g00607 419 Coils Coil 46 68 - -
Lapu4g00607 419 MobiDBLite consensus disorder prediction 30 64 - -
Lapu4g00607 419 MobiDBLite consensus disorder prediction 288 314 - -
Lapu4g00607 419 MobiDBLite consensus disorder prediction 260 322 - -
Lapu4g00607 419 MobiDBLite consensus disorder prediction 356 392 - -
Lapu4g00607 419 MobiDBLite consensus disorder prediction 350 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00607 Lapu-Chr4 6489264 6491491 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00607 8 412 C2H2 Transcription Factor Family AT4G25610 34.507 1.76e-26 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00607 - - gmx:100809067 464.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g00607 4 6489264 6491491 Lapu4g00607 4 6489264 6491491 ECH
Lapu4g00607 4 6489264 6491491 Lapu7g02029 7 36496883 36503271 PCT