Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00605 ATGGACTCGAAGCAGCTCGATCCCGCTGATCGTAAGGTTCGGGTTGTTGCCAGGATCCGCGGGTTTTCGGGTCCTGCGGCTAATTCGGAGCTTGGCACTGCGAGGACGGTGGACTGGATTTCGGTTAACGGCGAAAGTTCGGATGGTTTCTCTATCTCCTTCAAAGACCATTCTAGTCGGTATTTGGTGGACTACTGCTATAAGGAAGATGAAGACAGTGAAATGATATATTCAAGGGACGTAAAGCCTTTAGTGTCTGCAGCTTTTGAAGGTTACAACAGCACTATTATTGCACATGGAGCTAGGGGCAGTGGAAAGACCTACACAATTCAGGGCTCTGGTGACAGACCGGGTTTGGCAGTGCTTGCTATAGCTGAGTCTCTTTCACTGGCAGAGAAAAATGGGAAATCCATAGCTGTTTCTTTTTATGAGGTTGATCATCTGGAACGGGCCATGGATTTATTAAATCCAGAGAAACCACCAATTTTGGTTTTGGAAGATCGTGGCAGAATTCAGTTTAAAGGATTAACTCAGATTCCTGTGAAATCTATCACTGAATTTCAGAATTTGTTCTCGAGTGCATGTTTTACCCTGAAAGGAGCTCCCAGAAAAGGAGGGTGTGAAAGAGTTTATAGAAGTCATATGGGATTAATTGTGCATGTCTTTTGTCAGAGTGAAAGTGGAGGAAGTATTGTGAGCAAAATAAATTTTGTTGACTTGGCAGGTTATGAAGATGCTAGAAAAAAAAGTAGTGATGGCTCCTACCTTACTGAAATTAACAAAATTAACAAATCAATTTATGCATTATTCAACATTTGTCATGCTTTGAGTACAAATGACAGTCGTGTTCCATACCGGGAAAGTAAACTTACACGCATACTGCAGGATTCGTTAAAGGGAACTAGCAAAATTTTGTTGGTTTCATGCTTGAACCCATCATTTTGCCAAGACACTATTTACATTGTAAGCTTGGCATCACGGTCATGTCATGGGATTCATCATCAAACATCCTTAGATTCTACCAAGAAGAGTGTAAGTTCAACAAAACATATGGTTATGAAACATATACCTAAAAGTGTTTCAGGAACAACAAAGAAGTTACAAGGTTCTTCTAAACTACTTGAAAAAAATGTTGTTTCTAAGAAGTCTGCAATGAAAGGAAGGAAATTGTTTGAGGAAGCTACTCATTCTGCTGCTAAGGTTGAGAAGGAAATTTCCGTTGCTCATGTTACTCAAGTATCAAAGCCTTTTATGCCTTTGATGGATGATTCATCGTTGAATGCAAGCAGTGAGATGGGATTCAATCCCCTAGCAGTTCAGGACATTGTGGTGGATAGAGAGGATGGTCAAAAGGAGCATACCCCTGGTGTCAGTAATTGCTCTGAAGCATGGTCAACAATAGTTCAGAAAGACTATAATACGAACAAGGAAAACAGTTCAATGGCAATTGGAAATGGTCTATCGCCTATTAGCTCACCACCCATTAGTTCTCAGCTGCGTGATCTTTCTAATAGTCTTAAAATGTTATGTTCTTCTACTTCTTCATGTATGCAAATATCAGAAAAGGAACCCATTCCACTTGATATTGTAGAACCAAAAACTCCTACCAATGAACAAAACATGAGCATTAACCGGTGGGATGGAATGAATGGCAAAAGTCCCTGGGAGACATTCAGTATGCGAGGTTCTGGAATGAAGAATTCTATTGTTCAAGAATACCTTAAGTTTTTGAACACCGCTGACAAGGAAGAATTAAAAAGATTGAAGGGAATTGGGGAGAAGAGAGCTACCTTCATACTTGAACTTAGAGAAGAATCTCCCGAACCTTTCAAAAGTCTGGATGATTTAAAAGACATTGGACTTTCAGCAAAGCAGATTAAGGGAATGATGAAGAAGGAGATTGGAGAGCTTTTCAGTGAATTATAA 1926 0.4003 MDSKQLDPADRKVRVVARIRGFSGPAANSELGTARTVDWISVNGESSDGFSISFKDHSSRYLVDYCYKEDEDSEMIYSRDVKPLVSAAFEGYNSTIIAHGARGSGKTYTIQGSGDRPGLAVLAIAESLSLAEKNGKSIAVSFYEVDHLERAMDLLNPEKPPILVLEDRGRIQFKGLTQIPVKSITEFQNLFSSACFTLKGAPRKGGCERVYRSHMGLIVHVFCQSESGGSIVSKINFVDLAGYEDARKKSSDGSYLTEINKINKSIYALFNICHALSTNDSRVPYRESKLTRILQDSLKGTSKILLVSCLNPSFCQDTIYIVSLASRSCHGIHHQTSLDSTKKSVSSTKHMVMKHIPKSVSGTTKKLQGSSKLLEKNVVSKKSAMKGRKLFEEATHSAAKVEKEISVAHVTQVSKPFMPLMDDSSLNASSEMGFNPLAVQDIVVDREDGQKEHTPGVSNCSEAWSTIVQKDYNTNKENSSMAIGNGLSPISSPPISSQLRDLSNSLKMLCSSTSSCMQISEKEPIPLDIVEPKTPTNEQNMSINRWDGMNGKSPWETFSMRGSGMKNSIVQEYLKFLNTADKEELKRLKGIGEKRATFILELREESPEPFKSLDDLKDIGLSAKQIKGMMKKEIGELFSEL* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00605 641 FunFam Kinesin-like protein KIN-10C 563 637 - -
Lapu4g00605 641 Pfam Helix-hairpin-helix motif 577 624 - -
Lapu4g00605 641 SMART kinesin_4 10 340 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu4g00605 641 Gene3D - 565 637 - -
Lapu4g00605 641 ProSiteProfiles Kinesin motor domain profile. 12 331 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu4g00605 641 PRINTS Kinesin heavy chain signature 283 304 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu4g00605 641 PRINTS Kinesin heavy chain signature 234 252 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu4g00605 641 PRINTS Kinesin heavy chain signature 91 112 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu4g00605 641 SUPERFAMILY RuvA domain 2-like 570 633 IPR010994 -
Lapu4g00605 641 Gene3D Kinesin motor domain 1 330 IPR036961 -
Lapu4g00605 641 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 327 IPR027417 -
Lapu4g00605 641 PANTHER KINESIN-RELATED 15 450 IPR027640 GO:0003777|GO:0007018
Lapu4g00605 641 MobiDBLite consensus disorder prediction 529 548 - -
Lapu4g00605 641 Pfam Kinesin motor domain 51 327 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu4g00605 641 MobiDBLite consensus disorder prediction 533 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00605 Lapu-Chr4 6473701 6479560 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00605 12 313 Calmodulin-binding Proteins AT5G65930 31.447 5.20e-31 128
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g00605 4 6473701 6479560 Lapu4g00605 4 6473701 6479560 ECH