Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00597 ATGGAGATCTTCATTTTACCTGGAACACTTGCTTTCTTTGCTATATTACCTATTCTTTTGCTCTTCAAACTAGCATTTTCTTTGTGGATTTCACCCTTCCTCACTCATCTTAAGCTCAAAAGATGTGGCTTTGGAGGGCCACCACCAAGTTTTCCTCTTGGGAACATTCAAGAGATGAAAAAAAAGAACACTGTTAGTTCTTCACTGTGCTCCTCTAACCTCACCCATGATATACACTCCACTGTCTTCCCCTACTTTTCTCGCTGGCAGAGCTCTCACGGGAAGGTGTTTATCTATTGGTTGGGTACAGAACCCTTTTTATACATTGCTGATCCAGAATTTCTGAAAAAAATGTCCACTGAGGTTTTGGCTAAGAAATGGGGAAAACCTAGAGTGTTTAGACATGATAGAGACCCTTTGTTTGGAAATGGTTTGGTTATGGTTGAAGGCAACGAATGGGCAATGGCAAGCATGATGAGTGAGACAACGAATCGAATGATAGAAAGGTGGATTGCACAAATAAACTCGGGGAATCCCGAAATCGATGTAGAAAAAGAGGTTGTAGAAACTGCTGGAGAAATCATTGCAAAAACAAGCTTTGGCATGAAGGGGAAAAATGCAAAGGAAGTATCTGAAAAACTACGTGCCCTACAAATGATGCTTTTCAAGACAACAAGATACGTAGGGGTTCCATTTGAGAAGTGTTTCAACGTGAAGAAAACCCTAAAGGCCAAGAAACTTGGGAAAGAGATTGACAAACTTTTGTTATCCATCATAACATCTCGAACAAAATCAATCAAAAGACAAACTCAAGAAGACTTGTTGGGGTTGTTGTTGCAAGGAAATCATCAAGGTGATGGGAAGTTAGGGAAGACATTCACCACTAGAGATTTGTTGGATGAGTGCAAGACTTTCTTCTTTGCTGGCCATGAGACAACGGCATTGGCTATCTCATGGACTTTGTTGCTTCTTGCTATGCATGAAGATTGGCAAATCCAGTTAAGAGACGAGATTAGAGAAGTGGTCGGTGATAAAGAACTAGATCTCAAAGTGCTTGCGGGCTTGAAAAAGATGAAGTGGGTGATGAATGAAGTTCTAAGGCTCTACCCAACGGCACCAAATGTGCAAAGGCAAGCTAGAGAAGACATTCAAGTTGATAATTTAAAGGTTCCTAATGGCACCAACATGTGGATCGATGTTGTGGCAATGCACCATGATCCAACATTGTGGGGAAAAGATGTCAATGAGTTTAGACCAGAGAGGTTCATGAATGATGTCAATGGTGGATGTAACCACAAAATGGGGTACTTGCCTTTTGGGTTTGGAGGGAGAACATGTGTTGGAAGAAACTTGAGCTTCATGGAGTATAAGATAGTGCTAACCCTACTTCTCTCTAGATTTAGCTTTAAGGTTTCTCCAGGTTATAACCATTCACCCTCTATCATGCTCTCCCTTAGACCAACTTATGGACTTCATCTCTTAGTTCAACCCCTTTATTAA 1500 0.41 MEIFILPGTLAFFAILPILLLFKLAFSLWISPFLTHLKLKRCGFGGPPPSFPLGNIQEMKKKNTVSSSLCSSNLTHDIHSTVFPYFSRWQSSHGKVFIYWLGTEPFLYIADPEFLKKMSTEVLAKKWGKPRVFRHDRDPLFGNGLVMVEGNEWAMASMMSETTNRMIERWIAQINSGNPEIDVEKEVVETAGEIIAKTSFGMKGKNAKEVSEKLRALQMMLFKTTRYVGVPFEKCFNVKKTLKAKKLGKEIDKLLLSIITSRTKSIKRQTQEDLLGLLLQGNHQGDGKLGKTFTTRDLLDECKTFFFAGHETTALAISWTLLLLAMHEDWQIQLRDEIREVVGDKELDLKVLAGLKKMKWVMNEVLRLYPTAPNVQRQAREDIQVDNLKVPNGTNMWIDVVAMHHDPTLWGKDVNEFRPERFMNDVNGGCNHKMGYLPFGFGGRTCVGRNLSFMEYKIVLTLLLSRFSFKVSPGYNHSPSIMLSLRPTYGLHLLVQPLY* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00597 499 Gene3D Cytochrome P450 34 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00597 499 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00597 499 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00597 499 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00597 499 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00597 499 Pfam Cytochrome P450 82 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00597 499 PANTHER CYTOCHROME P450 FAMILY MEMBER 24 490 - -
Lapu4g00597 499 SUPERFAMILY Cytochrome P450 76 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00597 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Lapu4g00597 499 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00597 499 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00597 499 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00597 499 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00597 499 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00597 499 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00597 499 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00597 Lapu-Chr4 6326002 6329525 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00597 13 498 Cytochrome P450 AT5G52400 56.974 0.0 609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00597 - - gmx:100810679 883.634