Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00580 ATGATGAGTTCAGAGAAGGATAAAGAGAAAAACATGGTGTTGGGAGTGCATGTTGATGTTCTTCCATTAACTTTTGTGGTTCACTTGCTAGCAATTTCTGCTATAGTCATGGTTTTGGTTTGGAACATACACTTCAGGGGTGGCTTATCTTGGAACTCTTCCAACAAATCTCTCATCTTCAATATTCACCCTGTTCTTATGCTAATAGGAATAATAATTACTGGAGGTGAAGCCATTATAAGTTACAAATCTCTTCCTTTGAAGAAGAAAACAAAGAAATTGATACACCTTGTTCTGCATGCCATGGCACTCATACTTGGAATAATTGGAATTTACGCTGTCTTCAAGTTTCACAATGAAAGTGGAATTATCAATCTTTATAGTCTGCATTCATGGCTTGGAATTGCTGTTATAGTTCTCTACGGACTTCAGTGGATAGTTGGGTTTGCGATGTTTATCTGCAATGGAGGGAATTCATCCCTGAAAAGCACCACACTTCACTGGCATGTGATGATGGGGATCTTTGTGTATCTCTTGGCTGTTGGAACTGCATGTCTAGGGTTTCTAGAGAAGCTTACTTTTATGCAGACTTCAGGATTGCCAAAACGTTCCTCTGAGGCCCTTCTTGTCAACTTCACTGCCATTCTCACAATCTTCTATGCTGCCTTTGTTCTGCTTTCTGCTGTCTCACCTTCCTCAAACATATGA 708 0.3983 MMSSEKDKEKNMVLGVHVDVLPLTFVVHLLAISAIVMVLVWNIHFRGGLSWNSSNKSLIFNIHPVLMLIGIIITGGEAIISYKSLPLKKKTKKLIHLVLHAMALILGIIGIYAVFKFHNESGIINLYSLHSWLGIAVIVLYGLQWIVGFAMFICNGGNSSLKSTTLHWHVMMGIFVYLLAVGTACLGFLEKLTFMQTSGLPKRSSEALLVNFTAILTIFYAAFVLLSAVSPSSNI* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00580 235 PANTHER CYTOCHROME B561-RELATED 18 231 IPR043205 GO:0016491
Lapu4g00580 235 SMART 561_7 62 188 IPR006593 -
Lapu4g00580 235 FunFam Cytochrome b reductase 1 17 235 - -
Lapu4g00580 235 Pfam Eukaryotic cytochrome b561 62 194 IPR006593 -
Lapu4g00580 235 ProSiteProfiles Cytochrome b561 domain profile. 26 229 IPR006593 -
Lapu4g00580 235 Gene3D - 15 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00580 Lapu-Chr4 5928399 5932773 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00580 8 228 Chloroplast and Mitochondria Gene Families AT4G25570 63.348 2.04e-97 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00580 K08360 - pvy:116146978 291.197