Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00562 ATGTCGATTTCTCTGCATGAAATCATCTTCTCCTCTTGGTTCTTCCTCTCAATTGTTGCCTTCATCTTCTACTTTCTTTTAACAAATTTCCTCGCTCTTATTTTCAATTTGAACTATGATTCTGATTGTGCAACAACCGCATCATCACCACCATCACCACCATCTCTTCCAAAGCTTCCAATAATAGGAAACCTCCACCAACTTGGCACCCACACTCATCAAACTCTCCAATCCTTTGCTCAAACATATGGTCCTTTAATGTTGCTTCACTTTGGAAAGGTGCCAGTTCTTGTTGTCTCAACAGCTGAGGCTGCTCGTGAGGTTATGAAAACCCAAGACCACATTTTCTGCAGCAGACCACCTCGTAAGATGTTTGATATCTTCTGGTATGGTTCCAGAGATGTGGCATCTGCTCCATATGGTCACCAAAGGAGACAAACGAGGAGTATATTTATGTTGCATGTTCTCACTGCCAAAACGGTTCAATCCTTTTGTGCAATGAGAGAAGAGGAAATCTCCTTAATGATGGAAAAGATTAGGCAGTGTTGTTCATCTTTGATGCATGTGAATTTAACTGATTTGTTTTCTACAGTCACAAATGACATTGTGTGTAGAGCTGCTCTTGGAAAGAGGTACAGCGGAGAAGGAGGGAGAAAGCTTCAGGAGCCATTGAACGAGATGACAGAGTTATTGAGTGTTTCAGTCATAGGGGACTATATACCTTGGTTTGACTGGTTGGGAAGAGTTAATGGAATGCATGGTAGAGCAGAGAGAGTGGCTAAACAGCTTGATGAATTTCTGGATGAAGTTGTTGAGGAACATATCAGTTGTTGTTCCAAGAGAGGCAATGATGTTGATGGTGAAGGGCGGAATGATTTTGTAGACACTTTGCTGTGGATCCAAAAGACAAAAGCCTCAGGATTCCAGATTGATAGAACAACCATAAAGGCTTTGATCCTGGGCATCCTTGCTGGAGGAATAGAAACTACCTCCTCAAGCCTAGGGTGGATAATGACAGAACTTTTAAGGCATCCAATTGTGATGCAGAAGCTACAAGGTGAGGTCAGGAATGAGGTTAGAGGAAGAACTCACATAACCGAGGAGAATTTGAGAAGTATGCATTACTTAAAGGCAGTGGTTAAAGAAACTTTCCGATTACATCCTCCAATTCCCTTATTGCTTCCAAGGGAATCCATGGAAGATACCACAGTGATGGGTTATGGCATTGCAGCTAGAACACAAATAATAATTAATGCTTGGGCAATTGGAAGAGATCCTTCATGTTGGGACAAACCTGAAGAGTTTGAACCAGAGAGATTCTTAAACAGTTCAATAGATGTGAAGGGACATGATTTTGAAGTGATACCATTTGGAGCAGGAAGGAGGGGTTGTCCAGGAATAATGTTTGCCATGAATGTGATTGAGCTGGTGATAGCAAACCTTGTTCACCAATTCAATTGGGAAGTGCCCAGTGGAGCAATGGGGGATCAGACACTGGACATGACAGAAACTGCTGGCTTGACCAGTCATAGAAAATTCCCTCTCATGGCAATTGCATCCCCTCATGCATAA 1572 0.423 MSISLHEIIFSSWFFLSIVAFIFYFLLTNFLALIFNLNYDSDCATTASSPPSPPSLPKLPIIGNLHQLGTHTHQTLQSFAQTYGPLMLLHFGKVPVLVVSTAEAAREVMKTQDHIFCSRPPRKMFDIFWYGSRDVASAPYGHQRRQTRSIFMLHVLTAKTVQSFCAMREEEISLMMEKIRQCCSSLMHVNLTDLFSTVTNDIVCRAALGKRYSGEGGRKLQEPLNEMTELLSVSVIGDYIPWFDWLGRVNGMHGRAERVAKQLDEFLDEVVEEHISCCSKRGNDVDGEGRNDFVDTLLWIQKTKASGFQIDRTTIKALILGILAGGIETTSSSLGWIMTELLRHPIVMQKLQGEVRNEVRGRTHITEENLRSMHYLKAVVKETFRLHPPIPLLLPRESMEDTTVMGYGIAARTQIIINAWAIGRDPSCWDKPEEFEPERFLNSSIDVKGHDFEVIPFGAGRRGCPGIMFAMNVIELVIANLVHQFNWEVPSGAMGDQTLDMTETAGLTSHRKFPLMAIASPHA* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00562 523 PANTHER CYTOCHROME P450 71B11-RELATED 32 520 - -
Lapu4g00562 523 Gene3D Cytochrome P450 41 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00562 523 FunFam Cytochrome P450 83B1 41 518 - -
Lapu4g00562 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
Lapu4g00562 523 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00562 523 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00562 523 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00562 523 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00562 523 PRINTS E-class P450 group I signature 80 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00562 523 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00562 523 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00562 523 PRINTS E-class P450 group I signature 377 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00562 523 PRINTS E-class P450 group I signature 198 216 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00562 523 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00562 523 PRINTS E-class P450 group I signature 104 125 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00562 523 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00562 523 SUPERFAMILY Cytochrome P450 53 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00562 523 CDD CYP71-like 82 515 - -
Lapu4g00562 523 Pfam Cytochrome P450 53 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00562 Lapu-Chr4 5730455 5732564 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00562 52 520 Cytochrome P450 AT3G48310 49.574 9.68e-168 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00562 - - gmx:100810137 726.857