Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00561 ATGTCCACATCTCTGCATGAAAACTCCTCAATCTGGTTTTTCCTCCCAATCGTCACCTTAATCATCCTCTCTTTACGTTCTGTCATCAATCTTGTATCCAAATGTAATCATAATTTCAATTCTGCAATGGCCAAAAAAACCTCACCACCATCTCCTCCAACGCTTCCAATAATGGGAAATCTCCACCAAATTGGGACTCTCACACACCACACTCTCCAATCCTTGGCTCAAACCTACGGCCCTTTAATGTTACTTCACTACGGAAAGGTGCCAGTTCTTGTGGTCTCAACAGCTGAGGCAGCTCGTGAGGTTATGAAAACTCATGACCTTGTTTTCTCCAATAGACCACATCGTAAGATGTTTGATATCTTCTTGTATGATTCCAAAGATGTGGCATCTGCTCCATATGGCAACTACTGGAGGCAGATAAGGAGTATTTCTGTCTTGCATCTTCTCAGTGCCAGAAAGGTTCAATCCTTTGGTGCAGTGAGAGAAGAGGAAATCTCCATAATGATGGAAGAGATTAAGCAGTGTTTTTCTTCTTCGATGCCTGTGAATTTAACAGATTTATTTTCTACAGTCTCAAATAACATAGTGTGTAGAGCTGCTCTCGGAAGGAGATACAGTGAAGAGGGAGGGTTTAAGCTTCGGGAGCCATTGAATGAGATGATGGAGCTGTTGGGTGCTTCAGTTATAGGTGACTACATACCTTGGCTTGATTGGTTGGGGAGAGTTAATGGAATGTATGGCAGGGCAAAGAGAGTGGCTAAACAGCTTGATGAATTTTTTGATGAGGTTGTTGATGAGCATGTTAGTAAGAGAGGACATGATGTGCATGGTGATGATGAAGAAGAGCAGAATGATTTGATGGACATTTTGCTGAGGATCCAAAAGACAAACACCTTGGGGTTCCAGATTGATAAAACAACCATAAAGGCTTTGATCCTGGATATGTTTGTGGCAGGCACAGAAACTACGTCCACAATCCTTGGGTGGATAATGACAGAACTCTTAAGGTATCCAATTGTGATGCAGAAGCTAAAAGCTGAGATAAGGAATGTGGTTAGTGGAAGAACTCACATAACCGAGGAAGATTTAAGTAGCATGTGTTACTTGAAGGCAGTGATTAAAGAAAGTTTTCGATTACATCCTCCAGGTCCCTTGTTGCTTCCAAGGGAATCCATGGAAGATACCACAGTGATGGGTTATGGCATTGCAGCTAGAACACAATTAATAATTAATGCTTGGGCAATTGGAAGAGATCCTTCATGTTGGGACAAACCTGAAGAGTTTGAACCAGAGAGATTCTTAAACAGTTCAATAGATGTGAAGGGACATGATTTTGAAGTGATACCATTTGGAGCAGGAAGGAGGGGTTGTCCAGGAATAATGTTTGCCATGAATGTGATTGAGCTGGTGATAGCAAACCTTGTTCACCAATTCAATTGGGAAGTGCCCAGTGGAGCAATGGGGGATCAGACACTGGACATGACAGAAACTGCTGGCTTGACCAGTCATAGAAAATTCCCTCTCATGGCAATTGCATCCCCTCATGCATAA 1560 0.4237 MSTSLHENSSIWFFLPIVTLIILSLRSVINLVSKCNHNFNSAMAKKTSPPSPPTLPIMGNLHQIGTLTHHTLQSLAQTYGPLMLLHYGKVPVLVVSTAEAAREVMKTHDLVFSNRPHRKMFDIFLYDSKDVASAPYGNYWRQIRSISVLHLLSARKVQSFGAVREEEISIMMEEIKQCFSSSMPVNLTDLFSTVSNNIVCRAALGRRYSEEGGFKLREPLNEMMELLGASVIGDYIPWLDWLGRVNGMYGRAKRVAKQLDEFFDEVVDEHVSKRGHDVHGDDEEEQNDLMDILLRIQKTNTLGFQIDKTTIKALILDMFVAGTETTSTILGWIMTELLRYPIVMQKLKAEIRNVVSGRTHITEEDLSSMCYLKAVIKESFRLHPPGPLLLPRESMEDTTVMGYGIAARTQLIINAWAIGRDPSCWDKPEEFEPERFLNSSIDVKGHDFEVIPFGAGRRGCPGIMFAMNVIELVIANLVHQFNWEVPSGAMGDQTLDMTETAGLTSHRKFPLMAIASPHA* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00561 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Lapu4g00561 519 PANTHER CYTOCHROME P450 71B11-RELATED 29 516 - -
Lapu4g00561 519 FunFam Cytochrome P450 83B1 36 514 - -
Lapu4g00561 519 CDD CYP71-like 78 511 - -
Lapu4g00561 519 Gene3D Cytochrome P450 36 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00561 519 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00561 519 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00561 519 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00561 519 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00561 519 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00561 519 PRINTS E-class P450 group I signature 76 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00561 519 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00561 519 PRINTS E-class P450 group I signature 100 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00561 519 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00561 519 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00561 519 PRINTS E-class P450 group I signature 194 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00561 519 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00561 519 Pfam Cytochrome P450 49 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00561 519 SUPERFAMILY Cytochrome P450 49 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00561 Lapu-Chr4 5715676 5725134 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00561 45 516 Cytochrome P450 AT3G48270 49.260 1.29e-174 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00561 - - gmx:100806940 785.793