Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00560 CAAACTCCACGAGTGGTCATAATCTTGAAGCAGAGGCCAATGGCGAATTTTCCGAATGGAACCATTTCCTTCTGGTTCTTCATTCCCATTCTAGCATTCTTCATCTTACGAGCCTTTCCCACCATATTCAATCTTCTATCCAAACTGAATTCCAAATCAGCAAAAACCTTACCACCATCTCCTCCAAAGCTTCCAATAATAGGAAACCTACACCAGCTTGGCACCTTCACTCACCACACTTTCCAATCCTTTGCTCAAACCTATGGCCCTTTAATGCTGCTTCACTTCGGGAAGGTGCCAGTTCTTGTTGTCTCAAATACTGAAGCAGCACGTGAGGTTCTGAAAACCCAAGAACACATTTTCTGCAACAGACCACATCGTAAGATGTCTGATATCATCTTATATGATTCCAAAGATATGGCATCTGCTCCATACGGCAAATACTGGAAGCAGATGAGGAGTATTTGTGTCTTGCATCTTCTCAGTGCCAAAAAGGTTCAATCCCTTGGTGCGGTGAGAGAAGAGGAAATCTCCATAATGATGAAAGAGATTAAGCACTGTTGTTCTTCTTTGACGCCTGTGAATTTAACTGATTTATTTTCTATAGTCACAAAGGACATAATGGGTAGAGCTGCTCTCGGAAGAAGATACAGTGGAGAAGGAGGGAGTAAGCTTCGGGAGCCATTGAACGAGATGATGGAGCTGTTGGGTGCTTCAGTTATAGGGGACTACATACCTTGGCTTGATTGGTTGGGAAGAGTTAATGGAATGTATGGTAGGGCAAAGAGAGTGGCTAAACAGCTTGATGAATATTTTGATGAAGTTGTTGATGAGCATGTAAGTAAGAGAGGGTATGACGTGCATGGTGATGGTGATGATGATGATGATGATGAAGAAGAAGAGCAGAACGATTTGGTGGACATTTTGTTGAAGATCCAAAAGACAAATGGCATGATTGATAGAACAACCATAAAGGCTTTGATTCTGGTTATGTTTGTGGCAGGTACTGACACTAGCTCCTCAATCCTTGGGTGGATGATGACAGAACTCTTAAGGCACCCAATTGTGATGCAGAAGCTAAAAGATGAGGTAGGGAATGTGGTTAGTGGAAGAAGTCACATAACCGAGGAAGATTTAAGTAGCATGTGTTACTTGAAGGCAGTGATTAAAGAAAGTTTTCGATTACATCCTCCAGGTCCCTTGTTGCTTCCAAGGGAGTCCATGGAAGATACCACAATGATGGGTTATGGCATTGCAGCTAGAACACAATTAATAATTAATGCTTGGGCAATTGGAAGAGATCCTTCATGTTGGAACCAACCTGAAGAGTTTGAACCAGAGAGATTCTTAAACAGTTCAATAGATGTGAAGGGACATGATTTTGAAGTGATACCATTTGGAGCAGGAAGGAGGGGTTGTCCAGGAATAATGTTTGCCATGAATGTGATTGAGCTGGTGATAGCAAACCTTGTTCACCAATTCAATTGGGAAGTGCCCAGTGGAGCAATGGGGGATCAGACACTGGACATGACAGAAACTGCTGGCTTGACCAGTCATAGAAAATTCCCTCTCATGGCAATTGCATCCCCTCATGCA 1596 0.4273 QTPRVVIILKQRPMANFPNGTISFWFFIPILAFFILRAFPTIFNLLSKLNSKSAKTLPPSPPKLPIIGNLHQLGTFTHHTFQSFAQTYGPLMLLHFGKVPVLVVSNTEAAREVLKTQEHIFCNRPHRKMSDIILYDSKDMASAPYGKYWKQMRSICVLHLLSAKKVQSLGAVREEEISIMMKEIKHCCSSLTPVNLTDLFSIVTKDIMGRAALGRRYSGEGGSKLREPLNEMMELLGASVIGDYIPWLDWLGRVNGMYGRAKRVAKQLDEYFDEVVDEHVSKRGYDVHGDGDDDDDDEEEEQNDLVDILLKIQKTNGMIDRTTIKALILVMFVAGTDTSSSILGWMMTELLRHPIVMQKLKDEVGNVVSGRSHITEEDLSSMCYLKAVIKESFRLHPPGPLLLPRESMEDTTMMGYGIAARTQLIINAWAIGRDPSCWNQPEEFEPERFLNSSIDVKGHDFEVIPFGAGRRGCPGIMFAMNVIELVIANLVHQFNWEVPSGAMGDQTLDMTETAGLTSHRKFPLMAIASPHA 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00560 532 FunFam Cytochrome P450 83B1 45 527 - -
Lapu4g00560 532 Gene3D Cytochrome P450 45 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00560 532 CDD CYP71-like 87 524 - -
Lapu4g00560 532 PRINTS E-class P450 group I signature 343 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00560 532 PRINTS E-class P450 group I signature 323 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00560 532 PRINTS E-class P450 group I signature 473 496 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00560 532 PRINTS E-class P450 group I signature 463 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00560 532 PRINTS E-class P450 group I signature 386 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00560 532 PRINTS E-class P450 group I signature 85 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00560 532 PRINTS E-class P450 group I signature 109 130 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00560 532 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00560 532 PRINTS E-class P450 group I signature 427 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00560 532 Pfam Cytochrome P450 58 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00560 532 PRINTS P450 superfamily signature 387 398 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00560 532 PRINTS P450 superfamily signature 464 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00560 532 PRINTS P450 superfamily signature 334 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00560 532 PANTHER CYTOCHROME P450 71B11-RELATED 41 529 - -
Lapu4g00560 532 SUPERFAMILY Cytochrome P450 58 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00560 532 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 466 475 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00560 Lapu-Chr4 5705575 5708092 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00560 39 531 Cytochrome P450 AT3G48280 46.680 2.30e-166 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00560 - - gmx:100806940 731.48