Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00559 ATGTCGACCTCCATGCATGAAAGCTCTTCACGCTGGTTGTTCCTCCTATTGGCTACCTTCATTATCCTCAAATGGAATAATAATTCTATTGCTGCAATGGCCAAAAAATCCTTACCACCATCTCCTCCAAAACTTCCAATTATAGGAAATCTCCATCAACTTGGCAACCTCATTCATCATACTCTCCAATCCCTTGCTCAAACCTATGGCCCTTTAATGTTACTTCACTTTGGAAACGTGCCAATTCTTGTTGTTTCAACAGCTGAGGCAGCTCGTGAGGTTATGAAAACTCATGATCTTGTTTTCTGCAATAGACCACATCGTAAGATGTTTGATATCTTCTTGTATGGTTCCAAAGACGTGGGAGCTGCTCCATATGGTGAGTACTGGAGGCAGATAAAGAGTATCTTAGTCTTGCATGTTCTCAGTGTCAAAAGGGTTCAATCCTTTCATGCAGTGAGAGAAGAGGAAATCTCCATAATGATGGAAAAGATTTGGCAGTGTTGTTCATCTTTGATGCCTGTGAACTTAACTGATTTATTCTCTAGAGTCACAAGTGATATAGTGTGTAGAGCTGCACTTGGAAGAAGATACAGTGGAGAAGGAGGGAGTAAGCTTCGGGAGGCAATGAATGAGATGCAGGTGCTCTTGGGTGCTTCAGTTTTGGGGGACTATATTCCTTGGCTTGATTTGTTAGGAAGGGTTAACGGAATGTATGGTAGGGCAGAGAGAGCAGCCAAAGATATTGATGAATTAATTGATGATATTGTTGAGGAACATGTCAGTAAGAAAGACCATGATGACGTTAATGGTGAAGGCCACCACGAAGATTTTGTGGACATTTTGTTGTGGATACAAAGGACAAATGCTGTAGGATTCCCAATAGATAGAACAACCATAAAGGCTTTGATCCTGGATATGTTTGCTGCAGGTACTGAAACTACCTCCTCAGTCTTAGGATGGGCGATGACAGAACTCTTAAAACACCCAATTGTGATACAAGGTGAGGCAACTGTTAAAGAAACTCTTCGATTGCATACACCAGTTCCCTTGTTGCTTCCAAGGGAATCCATGCAAGATACCAAAGTGATGGGCTATGACATTGCAACCGGCACACAAATAATAGTTAATGCTTGGGCAATTTCCAGAGATCCTTCATACTGGAACCAACCTCAAGAGTTTCAACCAGAAAGGTTCTTAAATAGTTCAATAGATATCAAAGGACATGATTTTGAAGTGATCCCATTTGGAGCAGGAAGAAGAGGTTGCCCAGGAATAATGTTTGCCCTTGCTGTGAATGAGTTGGCTCTAGCAAACCTTGTTCACCATTTTAACTGGGAAGTGCCTTATGGAGTAGCTGGGGACCAAGCATTGGACATGACCGAAACTGTTGGATTGTCCTGTCGTAGAAAATTCCCTCTTGTTGCACTTGCATCCCCACAAATATAA 1449 0.4196 MSTSMHESSSRWLFLLLATFIILKWNNNSIAAMAKKSLPPSPPKLPIIGNLHQLGNLIHHTLQSLAQTYGPLMLLHFGNVPILVVSTAEAAREVMKTHDLVFCNRPHRKMFDIFLYGSKDVGAAPYGEYWRQIKSILVLHVLSVKRVQSFHAVREEEISIMMEKIWQCCSSLMPVNLTDLFSRVTSDIVCRAALGRRYSGEGGSKLREAMNEMQVLLGASVLGDYIPWLDLLGRVNGMYGRAERAAKDIDELIDDIVEEHVSKKDHDDVNGEGHHEDFVDILLWIQRTNAVGFPIDRTTIKALILDMFAAGTETTSSVLGWAMTELLKHPIVIQGEATVKETLRLHTPVPLLLPRESMQDTKVMGYDIATGTQIIVNAWAISRDPSYWNQPQEFQPERFLNSSIDIKGHDFEVIPFGAGRRGCPGIMFALAVNELALANLVHHFNWEVPYGVAGDQALDMTETVGLSCRRKFPLVALASPQI* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00559 482 Pfam Cytochrome P450 39 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00559 482 Pfam Cytochrome P450 336 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00559 482 SUPERFAMILY Cytochrome P450 39 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00559 482 CDD CYP71-like 68 474 - -
Lapu4g00559 482 PANTHER CYTOCHROME P450 71B11-RELATED 22 479 - -
Lapu4g00559 482 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 416 425 IPR017972 GO:0005506|GO:0016705
Lapu4g00559 482 FunFam Cytochrome P450 83B1 26 337 - -
Lapu4g00559 482 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00559 482 PRINTS E-class P450 group I signature 184 202 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00559 482 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00559 482 PRINTS E-class P450 group I signature 413 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00559 482 PRINTS E-class P450 group I signature 423 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00559 482 PRINTS E-class P450 group I signature 336 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00559 482 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00559 482 PRINTS E-class P450 group I signature 377 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00559 482 PRINTS P450 superfamily signature 337 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00559 482 PRINTS P450 superfamily signature 414 423 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00559 482 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00559 482 Gene3D Cytochrome P450 31 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00559 Lapu-Chr4 5694688 5696433 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00559 35 479 Cytochrome P450 AT3G48270 46.822 3.77e-156 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00559 - - gmx:100810154 702.975