Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00522 ATGGGTAAGGAGTGGTATTTTGCTGGAAGAACATCAAAGAGAGGTGTGGTAGTTGGAGGAGGAGGAGGAGGAGGAGGTGAAGCTGAAACACAAGCTCCTTCTGGTTGCATGTGTGCTGTTTTTCAGTTCTTTGATTTTCACCCCTTTCACTTTCCCAACATAAACCCACAACAAACCTCTTTCAAACCACCCTCATGCACTTTAGAAGACCATACCACTGTCTCCAAAGGTGCTGAAGCACCTAGGAACAGCTTGGAATCAGAGGATGGTGATGGTCCTGTTTCATCTCTCTCATCAAAAGAAGAAGATTTTAAAATTCCTAAGAATATTATGCAAATTAAGACAAGTGGAGGCACAAGAACAGGTGGTGGAAATTTGAATGACTTGTCTGCAGAAATCACCAGCTCACCAGGGACAAAGACACCAACTTTGGTTGCCAGGTTAATGGGTTTGGATCTTCTTCCAGGGACACACTCACCCTCTTTTTCTTCTTCTTCTTCGTGTCTTTCCACTCCAAACCCACAAGGCAATGCGCCACATCTGCACCACCACCTGAGGCACAAGCAACATGTCCAAACGAAGCATAGAAACAGCATAGACAGCAGTGACATTTCAGCCACGAGATCTTTGCCTGAGACACCAAGAATCTCCTCAGCAAGAAGATCAGATGTTGATTACCACCACAGATTCTCACTCCAAATCAACAAGGAAAACATGAACCTTGCTGAGGATTTGGAGCTCCCTAGGCTCTCATTTTCCAAAAGAAAGTGTGATGAGAACAATAGCAGGAGTTCAGGCAACTATGCTAGGCAAATAGTCAAACAGGTTAAGGAAGGCGTGGGCAGAAAAGTTGGCCAAGACATTACCAACACTCTCAAAATAAGAGAAGAAATTGTAGGCCAACTCAAAAGCAAAAAATCTTCCAAAACATCATCACTGAAAGCAATTGATGAAACTGAAACCAGTCCACTGAAAGCACAATCAAACACATCTTCCTATTCCCCAAGGCTTAGATTCATCGACAAGCACAAATCAAGCACCCCAACCACAACATCAACGCTCACCCCAAAAGACCAAAACATGCTAAAACTTCCTCCACCTCCTCCTCCAGTTAACACTCAGTTTCCAAGAGTTTTAACAAAACCAAAGCCTCAAGCATTGTTGTTGCCAGAGCAGCAAGATTTTCATCGGAACAACAAATCTGTCCCAAAATGCAAAATGGCTACCAATGAAAAGTTCAACTCAAGACTCAAAAGACCACCACAGACATCAGACATAATCAGAAACAAACAAGAAGAATCATTCCTCGTTCGTCCCACATCGTCCACTAGAGCCAGTGACACTAAAACCACTAAAAGCAAGAAAACTCATCCATTGTCCAGTAACCTCCTCAACAACATCAACAGTGTGTCAAATCTTCTTCCTGTCAAGACTGACCCTTCTCCTCCAGCAACCAAAATTCCTTCAAAACAGTCACAGGTGTGTGATAGTCAAGAGTCCAAAAGCAGCTCACAGTTATCTAGTTGTTCGCGCCAGAGGTACAAACAAGAAGGAACAACCACACTCGCCACCCGAGAAACGTCACAGAACAAACCAAACAGGGCCTCCGCCCCCATCGGAGCACCCCAGCCTCACTCTCTCTCTCACACCCCACAAGAGCTTCACTACATCACAGCAATCCTAGACCGTACAACTGCCCTAAACGAAGAGGGCACCCCCACAAGCCACCCACTTGACCCATCAATCTTCCTCCACCTGGAACACCTCGCCGCCAACAAAGATCTCAGCTTTTCCCCGAAAGAACAACTGGGTCACCATTGGAATCGGAAGTTACTGTTCGATGTGGTGGACGAGGTTCTGAAGGAGATTCTGCAAGAGAAAGGGAAGAAGAGGCTTTGGTTTTCGAAGGGTGTTGGTGGTTGTAGGCACAGTGGGAGCCTTGTGGAGAGGGTGTGGAAGAGGGTGGGGGAGTTCCCACGTGCGAAGTGTGAGGTGTTGGATGACATTGATGGGTTGATTGAGGGAGAGGACATGCAGAGAGAGAAAGATGGTGAAGGGTTGGAGGAAGAAGGTGAAGGGTTGGTGACAGAGATTGAAGGGAACATATGGGACACGTTAGTGCATGAAACGGTTATGCTCATAGATTGCTTGGGAAATGTGAGAAAAGAGAAGTTATTAGATGATGTGAAAATATCACATGTTTGTACTATTTCTCAATGCTAA 2223 0.4543 MGKEWYFAGRTSKRGVVVGGGGGGGGEAETQAPSGCMCAVFQFFDFHPFHFPNINPQQTSFKPPSCTLEDHTTVSKGAEAPRNSLESEDGDGPVSSLSSKEEDFKIPKNIMQIKTSGGTRTGGGNLNDLSAEITSSPGTKTPTLVARLMGLDLLPGTHSPSFSSSSSCLSTPNPQGNAPHLHHHLRHKQHVQTKHRNSIDSSDISATRSLPETPRISSARRSDVDYHHRFSLQINKENMNLAEDLELPRLSFSKRKCDENNSRSSGNYARQIVKQVKEGVGRKVGQDITNTLKIREEIVGQLKSKKSSKTSSLKAIDETETSPLKAQSNTSSYSPRLRFIDKHKSSTPTTTSTLTPKDQNMLKLPPPPPPVNTQFPRVLTKPKPQALLLPEQQDFHRNNKSVPKCKMATNEKFNSRLKRPPQTSDIIRNKQEESFLVRPTSSTRASDTKTTKSKKTHPLSSNLLNNINSVSNLLPVKTDPSPPATKIPSKQSQVCDSQESKSSSQLSSCSRQRYKQEGTTTLATRETSQNKPNRASAPIGAPQPHSLSHTPQELHYITAILDRTTALNEEGTPTSHPLDPSIFLHLEHLAANKDLSFSPKEQLGHHWNRKLLFDVVDEVLKEILQEKGKKRLWFSKGVGGCRHSGSLVERVWKRVGEFPRAKCEVLDDIDGLIEGEDMQREKDGEGLEEEGEGLVTEIEGNIWDTLVHETVMLIDCLGNVRKEKLLDDVKISHVCTISQC* 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00522 740 MobiDBLite consensus disorder prediction 60 100 - -
Lapu4g00522 740 MobiDBLite consensus disorder prediction 301 370 - -
Lapu4g00522 740 Pfam Domain of unknown function (DUF4378) 553 709 IPR025486 -
Lapu4g00522 740 MobiDBLite consensus disorder prediction 60 80 - -
Lapu4g00522 740 MobiDBLite consensus disorder prediction 415 447 - -
Lapu4g00522 740 MobiDBLite consensus disorder prediction 408 549 - -
Lapu4g00522 740 MobiDBLite consensus disorder prediction 157 223 - -
Lapu4g00522 740 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 714 - -
Lapu4g00522 740 MobiDBLite consensus disorder prediction 157 177 - -
Lapu4g00522 740 MobiDBLite consensus disorder prediction 455 536 - -
Lapu4g00522 740 Pfam DUF761-associated sequence motif 130 159 IPR032795 -
Lapu4g00522 740 MobiDBLite consensus disorder prediction 344 359 - -
Lapu4g00522 740 MobiDBLite consensus disorder prediction 198 216 - -
Lapu4g00522 740 MobiDBLite consensus disorder prediction 304 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00522 Lapu-Chr4 5096828 5100195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00522 111 710 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 33.594 8.05e-54 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00522 - - gmx:100795947 956.822