Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00516 ATGTCTCATCAACACCAACCCTCCATTGATCCTTATCACCATATCGACATAGTTCTAAACCCTAACGGAACCCTCACTCGTTTACGTCACTTTCCAAGCACACCACCCTCTTCAGACCCCACTCTCACAGTTCTCACCAAAGACATAATCATCAACCCACAAAACAACACCTCGCTACGTTTATTCTTACCCCAAATAGCACTATCCTCAAACCCAGAACACCAGAAGCTACCTCTCATTATTTTCTTCCACGGAAGCGGTTTCATCTTGTCCAGCGCCACCTCCACCATGTTCCACGACTTCTGCTCCGCCATGTCCGCCACCGTCCCCGCCGTGGTCGCCTCCGTCGAGTATCGTCTCGCGCCGGAGCACCGTCTCCCGGCGGCGTACGACGATGCAGTGGAGGCCTTGGAGTTTGTCCGAAACAGCCACGAAGAGTGGCTGACAAAACACGCCGACATAGGTAATTGTTATCTCATGGGCAACAGTGCGGGAGCAACAATCGCCTACTTCGCGGGCCTACGTGTGACAGACACGTTGCGTGATCTTGAGCCGTTGAAGATCCGAGGGCTCATATTGCGCCAGGTGTTTTTCGGTGGGGTCGAGAGGAGTGGGTCAGAGGTGAGGCTCGAAAACGACGAGGTTCTTCCGCTTCGCGTTACGGATTTGCTTTGGGAGTTGGCGCTGCCCGTTGGCGTTGACCGTGATCACGAGTATGCGAATCCGAGGGCTGAGAAGTGGGTTGAGAAATTAGGGAGAGTGAGGGATCTAGGGTGGAGGGTGTTGGTGAGTGGGAACGGTGGGGATCCAGTGAATGATCGTGAGAAAGAGTTGGTGGAGATGTTGGAAGAGAAGGGTATTGAAGTGGTGAGTGATTTTGATGAAGAAGGGTGTCATGGGGTGGAGTATGCTGATGAATCAAAGGCAAAACAACTCATTGAAGTAGTCAAACATTTCGTTTCCTCAAATGATGCTTAG 978 0.5194 MSHQHQPSIDPYHHIDIVLNPNGTLTRLRHFPSTPPSSDPTLTVLTKDIIINPQNNTSLRLFLPQIALSSNPEHQKLPLIIFFHGSGFILSSATSTMFHDFCSAMSATVPAVVASVEYRLAPEHRLPAAYDDAVEALEFVRNSHEEWLTKHADIGNCYLMGNSAGATIAYFAGLRVTDTLRDLEPLKIRGLILRQVFFGGVERSGSEVRLENDEVLPLRVTDLLWELALPVGVDRDHEYANPRAEKWVEKLGRVRDLGWRVLVSGNGGDPVNDREKELVEMLEEKGIEVVSDFDEEGCHGVEYADESKAKQLIEVVKHFVSSNDA* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00516 325 PANTHER ARYLACETAMIDE DEACETYLASE 20 302 - -
Lapu4g00516 325 Gene3D alpha/beta hydrolase 12 324 IPR029058 -
Lapu4g00516 325 Pfam alpha/beta hydrolase fold 80 301 IPR013094 GO:0016787
Lapu4g00516 325 SUPERFAMILY alpha/beta-Hydrolases 20 320 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00516 Lapu-Chr4 4992171 4993148 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00516 3 289 Carbohydrate Esterase AT5G16080 32.770 4.48e-46 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00516 - - gmx:100779813 515.768