Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00509 ATGCCATCCCGACAACTCTCCACCTCATCAGACACGCAGCCACGTCACCACCACCACTACCACCACCACTTTTTCGTTCCTCTCCTCGCCGCCACCGTCTCAGCCTTCTCCCTCCTCCTTCTCCTCTTCCTCATCTGCCACCGCACCCTCACGCGCAAACGCGCCACCCACCTCCCTCCTCCCCCTTCCTCCTCCCCCCCGCACCGCCTCTCCTTCTCCGTCCTCCGCCGCGCCACCAATTCCTTCTCTTCCCGCCTCGGCCATGGCGGCTTCGGCCCTGTATTCGCCGGCACCCTCGCCGGCGTCCCCGTCGCCGTCAAGCTCATGGACTCCGCCTCCTCCCACCAGGGGGAGCGTGAGTTCCACAACGAGCTCTTCTTCGCCTCCAAGCTCCTCTCTCGACACGTCATCACCGCCACGCACTTCTCCTCTGACCCCAAACGACGTCGCTTCCTCTTGGTCTATGAGCTCATGCAAAACGGTAATCTCCAAGACGCGCTTTTGCACCGCAAGTGCCCCGAACTCTCAAACTGGAACACCCGCTTCTCAATTATTCTCAACATAGCCAAAGGAATTCACTTTCTCCACTCCTGTGACCCCCCTGTTATCCACGGCGACATTAAACCGAGTAACGTTTTGCTTGATCGTGATTTCTCGCCCAGAATCGGCGATTTTGGGTTGGCGAGGTTGAGCTCGGAGCCTCCGAGGTTTGAAATTGAGGTTCTGGAGTGTGGTAGTGTTAATAATGATGAAGAGAAGAAAAAGACGAAGGAGGAGGAGCTTGATGATTGCGGATCGGTGGCGAGTACTCACAGTGTTTTTATGGAAGAAGGTAGCTTGGGAGTGGAGCAATCTCCTTCGCCAGAGACTGCGGCGATGATGGCGATGACTTCGCCGGAGACGGGTTTGGCGGCGGCTGCGGCGTCGCCGGGGTTTGAGAAGGAAGATGCTAAGAAGATGAATGGGAAAGGGTTGAAGAGTAATTCCGTGAGGGATTGGTGGTGGAAGCATGATAATGAGGTTGGGAGTGGGGAGAGTAAGAAGGTGAAGGATTATGTGATGGAGTGGATTGGGAGGGATGTGAATAAGGAAAGGGTGAAGGGTGGAATTGAGTATGGGGATGTGGAGATGGGGAAGGAAGAAGAAAAGAAGAAAAAGAAGAAGAAGAGAAGGGGGAAGGAAATGGAATGGTGGGAGTCAATGGAAGAGGAGAAGTTTGATGGGGTTGTGAAGGGGAAGAGAAGGACCGTGAGGGACTGGTGGAAAGATGAGTGTTTTGAGGAGAACGAAAAGAAGAAGAAGAAGAAAAAGAAGAAAAGGAAGGGTGGGAGTGTAAAGAGTGATGACATTGAGAATGGTGATGATTGGTGGGTGAGTGATGATGCATTGGACAAGAGGAAGGGGAAGAGTAGGAGTAGGAACAACCGTGGGAACATGGATTGGTGGATGGATGGGTTGAGTGGTGAGTTATGGAGAGGAAGGAGGAATAATAGCTTTGATTCTGCGAGTGGGGAGATTCCAAAGAGTGGTGGTGTTAGCAGTACTCCTAGTATGAGGGGAACTGTGTGTTATGTTGCTCCTGAGTGTGGCTATGGTGGGGATGTGACTGAGAAGTGTGATGTGTATAGCTTTGGGGTGTTGTTGCTTGTGATAATTTCAGGGCGGCGCCCACTTCAAGTGAGTGGTTCACCCTTGTCTGAGTTTCAAAGGGCAAATCTACTTTCCTGGGCGCGCCATTGTGCACGAAATGGGAAGCTTCTTGAGTTGGTTGATGAGTCTTTGCAGTTGTTGGATAAGGGGCAGGCTCTTCTCTGCATCAAGGTGGCTTTGCTTTGTTTGCTGAAGTCACCTGCTCGTCGTCCTTCATCGAAGGAGGTTGTGGGGATGCTTAGTGGGGAGTTGGAACCACCCCAATTGCCTGTTGAGTACTCTCCTTCAACCCCTTCTCGGTACCCTTTCAAGTCTAGGAGAAAAGGCAGTTTTCTTCCTAGGTTGAAGAGCCACGTTGGTGATATGATACCATTTGTAACCGAACATTGGAACTTGAAATAG 2052 0.5219 MPSRQLSTSSDTQPRHHHHYHHHFFVPLLAATVSAFSLLLLLFLICHRTLTRKRATHLPPPPSSSPPHRLSFSVLRRATNSFSSRLGHGGFGPVFAGTLAGVPVAVKLMDSASSHQGEREFHNELFFASKLLSRHVITATHFSSDPKRRRFLLVYELMQNGNLQDALLHRKCPELSNWNTRFSIILNIAKGIHFLHSCDPPVIHGDIKPSNVLLDRDFSPRIGDFGLARLSSEPPRFEIEVLECGSVNNDEEKKKTKEEELDDCGSVASTHSVFMEEGSLGVEQSPSPETAAMMAMTSPETGLAAAAASPGFEKEDAKKMNGKGLKSNSVRDWWWKHDNEVGSGESKKVKDYVMEWIGRDVNKERVKGGIEYGDVEMGKEEEKKKKKKKRRGKEMEWWESMEEEKFDGVVKGKRRTVRDWWKDECFEENEKKKKKKKKKRKGGSVKSDDIENGDDWWVSDDALDKRKGKSRSRNNRGNMDWWMDGLSGELWRGRRNNSFDSASGEIPKSGGVSSTPSMRGTVCYVAPECGYGGDVTEKCDVYSFGVLLLVIISGRRPLQVSGSPLSEFQRANLLSWARHCARNGKLLELVDESLQLLDKGQALLCIKVALLCLLKSPARRPSSKEVVGMLSGELEPPQLPVEYSPSTPSRYPFKSRRKGSFLPRLKSHVGDMIPFVTEHWNLK* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00509 683 SUPERFAMILY Protein kinase-like (PK-like) 58 653 IPR011009 -
Lapu4g00509 683 Gene3D Transferase(Phosphotransferase) domain 1 498 637 - -
Lapu4g00509 683 PANTHER OS07G0586332 PROTEIN 1 658 IPR044576 -
Lapu4g00509 683 SMART serkin_6 80 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g00509 683 ProSiteProfiles Protein kinase domain profile. 80 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g00509 683 Gene3D Transferase(Phosphotransferase) domain 1 66 251 - -
Lapu4g00509 683 Pfam Protein kinase domain 84 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g00509 683 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Lapu4g00509 683 Pfam Protein tyrosine and serine/threonine kinase 516 577 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00509 Lapu-Chr4 4894873 4897835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00509 508 630 Receptor kinase-like Gene Family AT3G58690 33.333 3.77e-09 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Lapu4g00509 Pkinase 1.6e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00509 - - gsj:114368603 1070.84