Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00495 ATGGGCCTGGCCATCCACACCTTTGATGATATTATGAGAGTTACTGAGAATCTCAGTGAGAAGTATATTGTAGGATATGGTGGCTCAGGTACCGTGTACAAATGTGTTTTGAAGAATTCCCGGCCAATTGCTATTAAACGACTATACGACCAGCATCAACACAACTCAAGGGAGTTTGAAACAGAACTTGAAACTATTGGCAGTATCAGACACAGGAATCTTGTCACTTTGCATGGTTATGCTCTAACTCCTAATGGAAATCTTCTTTTCTATGACTATATGGAGAACGGCTCTCTGTGGGATCTTCTTCATGGTCCCCTGAAAAAGGTAAAACTTGATTGGGAAGCTCGCTTGAGGATTGCTGTGGGAGCTGCTGAAGGACTTGCTTACCTCCATCATGACTGCAATCCTAGAATTATTCACAGGGATATTAAGTCCTCAAATATCCTGATAGATGAGAACTTTGAAGCTCGCCTGTCTGATTTTGGCATTGCCAAATGTTTGTCAACTACAAGAACTCATGCATCAACGTCTGTGCTTGGAACAATCGGCTATATTGACCCTGAGTATGCCCGAACATCTAGGCTGAATGAAAAATCCGACGTCTATAGCTTTGGCATTGTTCTACTTGAGCTACTAACAGGGAAGAAAGCAGTGGACAATGATTCCAACTTGCATCACTTGATATTATCTAAGGCAGATAACAACACTATAATGGAGACTGTGGATCCTGAGGTGTCTATTACCTGCATGGATCTGACTCATGTTAAGAAGACCTTTCAGCTTGCTCTTCTTTGCACAAAAGGAAACCCTTCTGAGAGGCCAACTATGCATGAGGTTGCCAGGGTTTTGGCATCACTACTCCCAGCACCTCCCAGCAACATCTTTGCCCCTCCTTCAAAGACCATTGATTATGCACAATTTGTGATTCAAAAGGGAAACAACCTCCATCCCCCACAAATGGAAAGGTTACAATCTCAGAAGTACTCTAATGATCAATGGTTTGTTCGCTTTGAGAATGTTGTATCTAATAACAGCCTATAG 1044 0.4234 MGLAIHTFDDIMRVTENLSEKYIVGYGGSGTVYKCVLKNSRPIAIKRLYDQHQHNSREFETELETIGSIRHRNLVTLHGYALTPNGNLLFYDYMENGSLWDLLHGPLKKVKLDWEARLRIAVGAAEGLAYLHHDCNPRIIHRDIKSSNILIDENFEARLSDFGIAKCLSTTRTHASTSVLGTIGYIDPEYARTSRLNEKSDVYSFGIVLLELLTGKKAVDNDSNLHHLILSKADNNTIMETVDPEVSITCMDLTHVKKTFQLALLCTKGNPSERPTMHEVARVLASLLPAPPSNIFAPPSKTIDYAQFVIQKGNNLHPPQMERLQSQKYSNDQWFVRFENVVSNNSL* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00495 347 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 4 285 - -
Lapu4g00495 347 ProSitePatterns Protein kinases ATP-binding region signature. 24 46 IPR017441 GO:0005524
Lapu4g00495 347 Pfam Protein kinase domain 21 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g00495 347 Gene3D Phosphorylase Kinase; domain 1 3 93 - -
Lapu4g00495 347 SMART serkin_6 18 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g00495 347 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 1 93 - -
Lapu4g00495 347 Gene3D Transferase(Phosphotransferase) domain 1 94 292 - -
Lapu4g00495 347 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Lapu4g00495 347 ProSiteProfiles Protein kinase domain profile. 18 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu4g00495 347 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 94 294 - -
Lapu4g00495 347 SUPERFAMILY Protein kinase-like (PK-like) 5 284 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00495 Lapu-Chr4 4780455 4786872 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00495 1 347 Receptor kinase-like Gene Family AT5G62230 73.199 0.0 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Lapu4g00495 Pkinase 3.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00495 K20718 - gmx:100305433 652.514