LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu4g00476	ATGGCTTCCCTTTCAGCTTCCACTGCTGCTGCATCCCTTGGCATGTCAGAAATGCTTGGAAACCCGATCAACCTCAGTGGTGCCACAAGGCCTGCTCCATCTCCCTCTAGCCCTGCCTCCTTCAAGACTGTGGCTCTTTTCTCAAAAAAGAAGGCAGCACCACCTCCAAAAAAAGCTGCCGTTGTCTCTCCTGTCAATGATGAGCTTGCCAAGTGGTATGGTCCTGACAGAAGGATCTTCTTGCCAGATGGTCTCTTGGACCGATCTGAGATCCCAGAGTACTTGACTGGAGAAGTCCCCGGAGACTATGGTTATGACCCATTTGGTCTCAGCAAGAAGCCAGAGGACTTTGCCAAATATCAGGCATTTGAGTTGATTCACGCCAGATGGGCAATGCTTGGTGCTGCTGGATTCATCATTCCTGAGGCCTTCAACAAATATGGCGCAAACTGTGGTCCTGAGGCTGTTTGGTTCAAGACAGGAGCTCTGCTTCTTGATGGGGGTACGTTGAACTACTTTGGGAAACCCATTCCCATCAACCTCATTGTGGCTGTCATTGCTGAGATCGTTCTTGTGGGAGGTGCAGAGTACTACAGAATTATTAATGGCCTGAATTTCGAAGACAAACTTCATCCAGGTGGTCCATTTGACCCATTGGGGCTTGCAAACGATCCAGATCAGGCTGCACTGCTAAAGGTGAAGGAAATTAAGAATGGTAGACTTGCTATGTTTGCCATGCTTGGTTTCTACTTCCAAGCCTATGTCACTGGAGAAGGTCCTGTTGAGAACCTTGCAAAGCATCTCAGTGACCCTTTTGGCAACAACTTGCTCACAGTCATTGCTGGGACTGCTGAGAGGACTCCAACTCTCTAA	873	0.488	MASLSASTAAASLGMSEMLGNPINLSGATRPAPSPSSPASFKTVALFSKKKAAPPPKKAAVVSPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPEDFAKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGGTLNYFGKPIPINLIVAVIAEIVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLANDPDQAALLKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVIAGTAERTPTL*	291

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu4g00476	290	Gene3D	Chlorophyll a/b binding protein domain	79	290	-	-
	Lapu4g00476	290	PANTHER	CHLOROPHYLL A/B BINDING PROTEIN	35	279	IPR001344	GO:0009765\|GO:0016020
	Lapu4g00476	290	FunFam	Chlorophyll a-b binding protein, chloroplastic	79	290	-	-
	Lapu4g00476	290	SUPERFAMILY	Chlorophyll a-b binding protein	72	281	-	-
	Lapu4g00476	290	Pfam	Chlorophyll A-B binding protein	92	253	IPR022796	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu4g00476	Lapu-Chr4	4573317	4576722	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu4g00476	11	290	Chloroplast and Mitochondria Gene Families	AT4G10340	82.918	1.13e-154	431

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu4g00476	K08916		-	gmx:100806585	527.709