Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00471 ATGGAGAAGTTGGAGAAATGGAAGATGGCTCTACATCAAGTAGCTAACTTGTCTGGCTTTCACTACAAATATGGAGAAGAATGTGAATACAAGTTTATTGGGAGGATTGTTGAGTGGGTCTTGAGTGAGATTAATCGTGCTCCTTTACATGTAGCGGATTACCCAGTTGGATTAGACTCACAAGTGTTTAAATTAATGGAGTTTTTGTATGCAGGATCTACTGCTGGTGTCCACTTGATAGGGATCTATGGAATGGGAGGGGTAGGGAAAACGACACTTGCTTTAGAAGTTTATATTTTGATGGTTCCTGTTTTCTTCAAAATGCTCCAAAAAAAGAGGCTTCTTTTGATTCTAGATGATGTTGACAAGCTTGAGCAGTTGCAGACACTTGTTGGAAGGCCTAACTGGTTTCGTCCTGGAAGCAAAGTTATCATCACCACTCGGGACAAACAACTGCTAGCATCTCATCATGTTCAAAGAACACATGAGGTGAAGAAATTTAATGACAACCATGCTCTTCAATTGCTTACATGGAAAGTTTTCAAATCAGAACAAGTTGATCCAACATATGTGGAGGTCTTGAATCGTGTAGCAACTTATGCTTGTGGCCTTCCATTGGCTTTGGAGGTAATAGGTGCCAACCTATGTAGAAAAAGTATACAAGAAAGCAAATCTATCATAGATCAACATAAAAGAATTCCAAACAATCAAATTCAAGAGACTCTTAAAGTAAGCTCCGATGCTTTGGAGGAAGAAGAGAAGAGAGTTTTTCTTGACATTGCTTGTTGCTTCAAGGGATATAAATTGACAGAGGTTGAAAATATACTTCATGATCATCATGGTGCTTGCATGGAATATCATATTGGCGTGTTGGTCTCAAAGATTGGTCAGTATGATAGAGTTACATTGCATGACTTGATTGAGGACATGGGTAAGGAAATTGTCAGACAGGAATCACCAGAAGAACCAGGGAAGCGCAGTAGATTATAG 990 0.3919 MEKLEKWKMALHQVANLSGFHYKYGEECEYKFIGRIVEWVLSEINRAPLHVADYPVGLDSQVFKLMEFLYAGSTAGVHLIGIYGMGGVGKTTLALEVYILMVPVFFKMLQKKRLLLILDDVDKLEQLQTLVGRPNWFRPGSKVIITTRDKQLLASHHVQRTHEVKKFNDNHALQLLTWKVFKSEQVDPTYVEVLNRVATYACGLPLALEVIGANLCRKSIQESKSIIDQHKRIPNNQIQETLKVSSDALEEEEKRVFLDIACCFKGYKLTEVENILHDHHGACMEYHIGVLVSKIGQYDRVTLHDLIEDMGKEIVRQESPEEPGKRSRL* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00471 329 Gene3D - 49 102 IPR027417 -
Lapu4g00471 329 SUPERFAMILY "Winged helix" DNA-binding domain 237 319 IPR036390 -
Lapu4g00471 329 Gene3D - 1 48 IPR035897 -
Lapu4g00471 329 Gene3D - 166 254 IPR042197 -
Lapu4g00471 329 Pfam NB-ARC domain 106 232 IPR002182 GO:0043531
Lapu4g00471 329 Gene3D - 104 162 IPR027417 -
Lapu4g00471 329 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 100 IPR044974 GO:0006952
Lapu4g00471 329 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 260 IPR027417 -
Lapu4g00471 329 Coils Coil 235 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00471 Lapu-Chr4 4552646 4554113 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00471 77 329 WRKY Transcription Factor Family AT5G45050 31.126 2.80e-30 119