Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00468 ATGGAGTGCAATAAGGATGAGGCTACCAGGGCTAAAGAAATTGCCGAGAGGAAGTTTGCTGCAAAGGATATGTCGGGCGCAAAGAAATTTGCTTTGAAGGCCCTAAATTTATTTCCTGAACTTGATGGTATTTCTCAAATGGTAGCAACACTCGATGTGTATATTTCTGCTGAGAATAAAACAAACGGAGAAGCAGATTGGTACGGTGTACTTGGTGTGAACTCCCTTGCTGATGATGATACAGTAAGGAGACAATACAGAAAGCTAGCTCTCATGCTTCACCCTGACAAGAACAAGTCGATTGGAGCTGATGGGGCCTTCAAACTTGTTTCAGAGGCATGGAGTTTACTATCAGACAAGGCTAAAAGGGCAGCATATGATAAGAGAAGTGGAAAAGAACGGAAAGTTTCTACCAAGTTTGGAGGTTCATCAACACAAAAAGGGACTAATGGTAATTACAATTTTACTAAGACTACCCCTTCAAGCGCTACTGCTCAGAAGAATACTGCTAAAGAGCACACTTCATCTTCTGCTCATAAGTCAAAATCAAATACATTTTGGACTGTTTGCATTCGATGCAAAATGCAGTACGAGTATCTTAGAGTTTATCTTAACCTTAAACTCTTATGTCCAAACTGCCGTACAGCATTTGTGGCTGTAGAGACTGCTCCTCCACCTGCAAGTGGTATTAGACCTGCAGCTCAATGGAATTTTTCACAGAAGAAGCAAAATTCCAACCGCCAATTACCCAATAAAAGCAAATCAAATGCCGGAAAGAATAACATAGCAGCTCCAAATGTTGGGGCAGGGTCTTATAGTAACACTGAAACAGCCAGTTTCCAGTGGGCTCCATTCTCAAAATCATCCGGTGGTTCCAATGTGGCTCAAGCTGCAAGTGTGGTTCAGCAGGCATATGATAAAGTGAAGCGAGATCGTGAGGAGGCACAAGCAGCTAGCAAAAGGGAAGAGGCCTTAAAAAGGAAGCAGCATGTTTCTAAAAGGGGTTACTATAATCCTGCTAAGAAAAGAAGAGGGGGCACGGAGGATGCAAGTGCAAGTGGGGGTAAGGAAAATCGAATGAGTGTGGGAACAAACTTATCTAAACAGTCGAATTTTGAATATAATAGGGTCAATGGAATCAACAAGACTGACAGTTTTGGGGATATCTCCCCTGTTGAACTTCGGAACCTTCTTATGGAGAAAGCTAGAAAAGAAATTAGCACTAAACTCAGGGAAAATCTGTCAAATGCTGTTGATAAGACAGTGATGAAAGAGAGTGGAAATGACTTCCACGAGGTGAACGAGAAAGGAGAAAAATGTTTAAGAAACTCTGAAATGTGTGCTCAAGATAACACTGACATCAAGTTGTTTGCAGGTTCTACAATTGCTAAAGGTAGCAGAAAATTTTTGGAAACGACAGCTATAGATGTACCAGATCCCGACTTCCATGATTTTTACAAAGATCGAACTGAAATATCTTTCACTGAAAATCAAGTATGGGCTGTGTATGATAACGATGATGGGATGCCTCGATGTTATGCAATGATTCACGGCATCATCTCCCTGAATCCATTCAAGATAAAGATCAGTTGGCTGAACCCAAATACCAACAGTAAACTGGACCCCATTAAATGGGTTGCTTCAGGCTTTTCAAAAATTTGTGGGGATTTCACATTGAGCAGACCTGAAATCTGTAGCTCGACCAACTTTTTCTCCCACAAGGTTAGGTGGAGAACAGGTGCTGATGGGGCTATTTGTATATATCCGAGGAAAGGGGATGTTTGGGCCATGTACAAGAATTGGTCTCCTGACTGGGATGAGCTAACACCACACGAGGTTATACACAAGTTTGAAGTGGTTGAAGTACTTGAGGATTTTATTGACGGGCATGGCATGGATGTTATTCCTCTGGTCAAAGTGGCTGGATTCAGGACAGTATTTCACCATCACTTAGATCCAACAGAAATCAGGATCATTCCGATGGAAGAGATGTTTCGATTCTCTCATCAAATACCTTCATATGTACTCACTGGTCAAGAAGCTCCAGATGCTCCAAAGGGTTGCAGGGTGTTGGACCCAGCTGCTACTCCATTTGAATTTCTTCAGCTAATAGAAGTTGTGAAGGAGGAAGACATGGGAGACAGAGAGGATACTGATGTCAAAGAACCAAGTGATATCATAAAAAAAGATAGTAATGAGGAAATGGTCAACTACATGGGAAAAGTTGAGGAAAAACCGAAGGGGAAGGACGAAGACATGCAGGAAATAGATACAAGTGATGACATGACAAAAGCTAATAATGAGGAAATGATAAATGATATGGGGAAACATGGGGAAGGACAGCAGGGAAAGAACAAAGACATGCAGGAAGTAGAAACTTTGAAAGAGGACAAAGAGAAAGAAGATATGCAGTAG 2415 0.4161 MECNKDEATRAKEIAERKFAAKDMSGAKKFALKALNLFPELDGISQMVATLDVYISAENKTNGEADWYGVLGVNSLADDDTVRRQYRKLALMLHPDKNKSIGADGAFKLVSEAWSLLSDKAKRAAYDKRSGKERKVSTKFGGSSTQKGTNGNYNFTKTTPSSATAQKNTAKEHTSSSAHKSKSNTFWTVCIRCKMQYEYLRVYLNLKLLCPNCRTAFVAVETAPPPASGIRPAAQWNFSQKKQNSNRQLPNKSKSNAGKNNIAAPNVGAGSYSNTETASFQWAPFSKSSGGSNVAQAASVVQQAYDKVKRDREEAQAASKREEALKRKQHVSKRGYYNPAKKRRGGTEDASASGGKENRMSVGTNLSKQSNFEYNRVNGINKTDSFGDISPVELRNLLMEKARKEISTKLRENLSNAVDKTVMKESGNDFHEVNEKGEKCLRNSEMCAQDNTDIKLFAGSTIAKGSRKFLETTAIDVPDPDFHDFYKDRTEISFTENQVWAVYDNDDGMPRCYAMIHGIISLNPFKIKISWLNPNTNSKLDPIKWVASGFSKICGDFTLSRPEICSSTNFFSHKVRWRTGADGAICIYPRKGDVWAMYKNWSPDWDELTPHEVIHKFEVVEVLEDFIDGHGMDVIPLVKVAGFRTVFHHHLDPTEIRIIPMEEMFRFSHQIPSYVLTGQEAPDAPKGCRVLDPAATPFEFLQLIEVVKEEDMGDREDTDVKEPSDIIKKDSNEEMVNYMGKVEEKPKGKDEDMQEIDTSDDMTKANNEEMINDMGKHGEGQQGKNKDMQEVETLKEDKEKEDMQ* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00468 804 MobiDBLite consensus disorder prediction 311 330 - -
Lapu4g00468 804 MobiDBLite consensus disorder prediction 239 268 - -
Lapu4g00468 804 Coils Coil 301 328 - -
Lapu4g00468 804 PANTHER BNAC03G44070D PROTEIN 1 697 - -
Lapu4g00468 804 Pfam Domain of unknown function (DUF3444) 473 680 IPR024593 -
Lapu4g00468 804 MobiDBLite consensus disorder prediction 740 804 - -
Lapu4g00468 804 PRINTS DnaJ domain signature 122 141 IPR001623 -
Lapu4g00468 804 PRINTS DnaJ domain signature 102 122 IPR001623 -
Lapu4g00468 804 PRINTS DnaJ domain signature 86 101 IPR001623 -
Lapu4g00468 804 PRINTS DnaJ domain signature 68 86 IPR001623 -
Lapu4g00468 804 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Lapu4g00468 804 MobiDBLite consensus disorder prediction 135 178 - -
Lapu4g00468 804 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Lapu4g00468 804 SMART dnaj_3 65 122 IPR001623 -
Lapu4g00468 804 Pfam DnaJ domain 66 127 IPR001623 -
Lapu4g00468 804 Gene3D DnaJ domain 63 183 IPR036869 -
Lapu4g00468 804 MobiDBLite consensus disorder prediction 311 365 - -
Lapu4g00468 804 MobiDBLite consensus disorder prediction 137 172 - -
Lapu4g00468 804 SUPERFAMILY Chaperone J-domain 60 126 IPR036869 -
Lapu4g00468 804 CDD DnaJ 66 119 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00468 Lapu-Chr4 4518939 4524211 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00468 4 345 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 29.915 2.72e-33 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00468 - - gmx:100816712 1297.34