Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00446 ATGCTCAATCTTCTCACCAAGCATTGTGTGTGTATATGTATATATACACCTTGTTGTTGCATCAAGATGCTGTGCAAAACCCTTTTGAAGTCTTTGAAGATTGTGATCATGGCTAATTTGCTGACACTGTTTTTTGTTGTGGAAATGATAGTGGTGAGTGGTTTCAGTTTGGGAGCAAGTGGCTTGAACATGAACTACTACTTGTTGAGTTGCCCTTTGGCTGAACTTATTGTTAAGAACACAGTCAATAGAGCTCTGCAGGATGATCCCACCCTAGCAGCAGGGCTTGTCAGAATGCACTTCCATGACTGTTTCATAGAGGGATGTGATGGCTCAGTTCTGATCGACTCCACTAAAGACAACACAGCAGAAAAAGATTCACCAGCAAATTTGAGCTTGAGAGGCTACGAAGTAATAGATGATATAAAGGAAGCACTTGAAAGACAATGCCCAGGAGTGGTTTCTTGTGCTGACATTCTTGCTATGGCTGCTAGAGATGCAGTTTTCTTTGCAGGGGGTCCTGTGTATGACATACCAAAAGGTAGGAAGGATGGAACAAGGTCCAAAATTGAGGACACTATCAATCTTCCTGCACCCATTTTCAATGCTTCTCAGCTCATCAAGGTGTTTGGGCAACGTGGGTTTTCTGCAAAAGACATGGTGGCTCTCTCAGGAGCTCACACATTAGGAGTGGCAAGGTGTTCTTCATTCAAGCAGAGACTTACCCCACTGGATCCATCTTTGGACTCACAATTTGCAAAGACACTCTCCAAGACATGCAGTGCTGGTGACACTGCAGAGCAACCCTTTGACTCCACGACGAACGATTTCGACAACCTATACTTCAACGCTCTGGTCTCAAACAACGGTGTTCTCACATCAGACCAAACGTTGTACACTACCCCACAAACCAGGAACATTGTGAACTCTTATGCAATGAACCAGGCCTTGTTCTTCTTGGATTTTCAACAGGCAATGGTGAAGATGAGCATGCTCGATGTCAAAGAAGGGTTCAAAGGAGAAGTACGAAAAAATTGCCATAAAATAAACTGA 1053 0.4368 MLNLLTKHCVCICIYTPCCCIKMLCKTLLKSLKIVIMANLLTLFFVVEMIVVSGFSLGASGLNMNYYLLSCPLAELIVKNTVNRALQDDPTLAAGLVRMHFHDCFIEGCDGSVLIDSTKDNTAEKDSPANLSLRGYEVIDDIKEALERQCPGVVSCADILAMAARDAVFFAGGPVYDIPKGRKDGTRSKIEDTINLPAPIFNASQLIKVFGQRGFSAKDMVALSGAHTLGVARCSSFKQRLTPLDPSLDSQFAKTLSKTCSAGDTAEQPFDSTTNDFDNLYFNALVSNNGVLTSDQTLYTTPQTRNIVNSYAMNQALFFLDFQQAMVKMSMLDVKEGFKGEVRKNCHKIN* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00446 350 ProSitePatterns Peroxidases active site signature. 93 104 IPR019794 GO:0004601
Lapu4g00446 350 ProSiteProfiles Plant heme peroxidase family profile. 61 350 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu4g00446 350 PRINTS Haem peroxidase superfamily signature 172 184 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu4g00446 350 PRINTS Haem peroxidase superfamily signature 154 171 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu4g00446 350 PRINTS Haem peroxidase superfamily signature 270 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu4g00446 350 PRINTS Haem peroxidase superfamily signature 93 107 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu4g00446 350 PRINTS Haem peroxidase superfamily signature 219 234 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu4g00446 350 FunFam Peroxidase 197 329 - -
Lapu4g00446 350 Pfam Peroxidase 78 313 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu4g00446 350 ProSitePatterns Peroxidases proximal heme-ligand signature. 219 229 IPR019793 -
Lapu4g00446 350 SUPERFAMILY Heme-dependent peroxidases 61 350 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lapu4g00446 350 CDD secretory_peroxidase 61 349 IPR033905 GO:0004601|GO:0042744
Lapu4g00446 350 PRINTS Plant peroxidase signature 268 283 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu4g00446 350 PRINTS Plant peroxidase signature 284 301 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu4g00446 350 PRINTS Plant peroxidase signature 218 230 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu4g00446 350 PRINTS Plant peroxidase signature 153 163 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu4g00446 350 PRINTS Plant peroxidase signature 134 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu4g00446 350 PRINTS Plant peroxidase signature 71 90 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu4g00446 350 PRINTS Plant peroxidase signature 95 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu4g00446 350 PRINTS Plant peroxidase signature 172 187 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu4g00446 350 PRINTS Plant peroxidase signature 324 337 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu4g00446 350 FunFam Peroxidase 65 204 - -
Lapu4g00446 350 Gene3D Peroxidase, domain 2 197 329 - -
Lapu4g00446 350 PANTHER PEROXIDASE 25-RELATED 44 337 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu4g00446 350 Gene3D - 65 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00446 Lapu-Chr4 4356106 4358652 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00446 35 350 Peroxidase AT4G33420 73.101 2.71e-172 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00446 K00430 - gmx:100809245 602.053