Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00421 ATGCTTGAGGCAAGAGGTTTTCCTTCAAAATTCGGTATTAGAGTTCTGCAAGAAAAATCTCTCATCAAAATTCGTGGATGTCGACATGAAACTGTGACCATGCACGACATGATTCGGTCTATGGGAAAAGAAATAGTTAGACAACAATCAACTCCTCCTCACAAACGGAATAGGTTGTGGTTTTACGAGGACATTGTTTGTGTATTGGAGAAAAACATGGAAAATGATAAAATTGAAGCGATGATGTTGGACATGCCTGAACACCAAGAAATGCAGTGCAATCAAAAGTTGTTTGGAAAAATGAAAAACTTACGGATGATTCTTATCAGAAAGAAAGTTGGATTTCTTAGAAGCCCTACTGCTCTGCCAAACAGTTTGAGAGTGCTGGAATGGAGGGAATATCCTGCAACTTCTTTACCGTGTAATTTTCGTTTGAAGAATCTTGTCATACTGAACTTGTCACACAGTTACTTTGCATGGGACAAACCACTTGAGAATTCAAAGGTTTTGAGACACTTAATTCTCAAAGGTTGTAAGAATATTAGAAGAGTACCTGACATGTCTGGTTTCCCCAATTTGACAGAATTTTGTGTTGGTGAATGCACAAATTTGATTGAAATTCACGATTCAGTTGGATGTTTACGTAATCTTCGAGAGTTTTGTGCTGAAGGATGCACCAAGCTGACCATTGGCCCAATTGGAATAAAGTTGACAGCTTTGGAGCATCTGTGCCTTCGGGATTGCAACAGTCTTGTTATGTTTCCAGAAATATTGGCACCAATGCACAAACTAAAATTTGTTGACTTGGAAGGAACTGCCATAAAAAATCTACCACATTCAATGCAAAATCTTGAGGGTCTTCAAATCTTGTACCTGGGAAAAGGCAAAATGCTTGAAATTAATGGATCATTCAATTTCTTTCAACAGCTGCCAATGTTCTTTCCTAATTTGACAGAACTATATTTACGAGACTTAGACATTACAGTACTCCCTGCCTGCATTGAAGAATGTCACAACTTGAAATTTCTACACGTGACTAACTGCAAGAAGCTTCAAGAAATTAGAGGACTTCCATCGAGCATAAATGAGTTCTCAGCAGCAAACTCTCCAGTTAAAGCCAATTCTTTGACATTAAAACTCAGACAGGTCATTCATTCTGCAGCCATAAGAATCTTTGTTCTTCCAGGTCGGAAAATCCCAGAATTGTTTGACTACTCTAGCAGGGGAAACTCTCTACGTTTTTGGTTTCGTAAAGAATTGCCCTCTCTTGCTGTGTGTGCTATTATTGGAGTTTGGGATAATGTCAAGCCTCCTTTCGTTGCCAGTTTCAATTTCTATGTTAAATTAAATGATATCTATATGTGTGTTTCTTGTTTTCGTTGTGGTAATATTACCTGGACAACTGAGGATAGTCACATAATCATACTCAACCGTCAAAAGGATTTTCAACATCCATTGAATTCAGATATTCAAAGAGCGCTTCTGACGAATGTGTGGATTCCTGGGAAAATATTGTTGAGGATAGAACCACAAAATGATCCAAGTAGGTTGGGAGCAATTAAGAAGACCGGAGTTTATGTAAATCGAACATTTAGTAGAGTGGAGGATGTTCGGTTCAGAGATCCCTACGCTCCCAATAAAGCAAATAATATGGAAAATAAACTTATGTTGCTTGGTGAGGCACCTGATATACAGCAAGAGCAACAATCGCCAGCTTTATTAAACCCCACAATCCCACTAGAATCTGCTGTAGGAGAACAACCTTTGAATTATGTGTATAGCAATTCAGATGGAGCATCAGTGGATGAACCGAAAATAGCTTCAAGTTTTGCTGCGATGCAAAATGGAAAGGCCGAAGAAGAAATTGCAGCACTTATATCAGAAGTTTCAGGTGAGTTTTCTGCTCAGAGCAGGGATTACATTGAAGTAAGTTTGAAAATTGAGTCCACAGCATCCCAGTCACGTAAAGTTGATGAAGTAGAAGCAGGTTTGGAAACTGAGAAGAAGTTCAGGAATACCATGCTCTTGAGAAATGAAATACACCAAAGACTGAATAGGATTAAGAAAATGAAAGAAGATTTAGGAGAGAAACTCAGTGCTATTAAAGCCGACATTTCTGCCATTGAAGCTAACAACTCTTCCATTAAAGCTAACATCTCTTCCATTAAAGCTAACATTTCTGGATATTGA 2190 0.3831 MLEARGFPSKFGIRVLQEKSLIKIRGCRHETVTMHDMIRSMGKEIVRQQSTPPHKRNRLWFYEDIVCVLEKNMENDKIEAMMLDMPEHQEMQCNQKLFGKMKNLRMILIRKKVGFLRSPTALPNSLRVLEWREYPATSLPCNFRLKNLVILNLSHSYFAWDKPLENSKVLRHLILKGCKNIRRVPDMSGFPNLTEFCVGECTNLIEIHDSVGCLRNLREFCAEGCTKLTIGPIGIKLTALEHLCLRDCNSLVMFPEILAPMHKLKFVDLEGTAIKNLPHSMQNLEGLQILYLGKGKMLEINGSFNFFQQLPMFFPNLTELYLRDLDITVLPACIEECHNLKFLHVTNCKKLQEIRGLPSSINEFSAANSPVKANSLTLKLRQVIHSAAIRIFVLPGRKIPELFDYSSRGNSLRFWFRKELPSLAVCAIIGVWDNVKPPFVASFNFYVKLNDIYMCVSCFRCGNITWTTEDSHIIILNRQKDFQHPLNSDIQRALLTNVWIPGKILLRIEPQNDPSRLGAIKKTGVYVNRTFSRVEDVRFRDPYAPNKANNMENKLMLLGEAPDIQQEQQSPALLNPTIPLESAVGEQPLNYVYSNSDGASVDEPKIASSFAAMQNGKAEEEIAALISEVSGEFSAQSRDYIEVSLKIESTASQSRKVDEVEAGLETEKKFRNTMLLRNEIHQRLNRIKKMKEDLGEKLSAIKADISAIEANNSSIKANISSIKANISGY* 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00421 729 SUPERFAMILY L domain-like 34 355 - -
Lapu4g00421 729 Gene3D Ribonuclease Inhibitor 234 380 IPR032675 -
Lapu4g00421 729 Gene3D Ribonuclease Inhibitor 87 233 IPR032675 -
Lapu4g00421 729 SUPERFAMILY "Winged helix" DNA-binding domain 10 69 IPR036390 -
Lapu4g00421 729 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 236 357 IPR044974 GO:0006952
Lapu4g00421 729 Coils Coil 684 711 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00421 Lapu-Chr4 4132176 4144787 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00421 1 374 WRKY Transcription Factor Family AT4G12020 30.900 3.20e-29 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00421 - - vum:124821418 1037.33