Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00398 ATGAGAGAGAATATTTCAGATTCTTGGCTAGTTATGATCTCAGTGATATTGGTCACGGTGATATTTGCAAAAATAATTCAATTCAAGTTAAGGAAGGAAGATAGAAGCAAATGCAGATTACCACCAGGAAGGAGAGGGTGGCCTTTGATTGGAGACAGCATCAATTGGTACAATGCTGTTGCAAGTTCTCATCCTCCTCAGTTTGTTGAAGAAATGGTGAAGAGGTATGGTAAGATATTTTCATGCAGCCTATTTGGCAAATGGGCAGTGGTGTCAGCAGATCCAAGCTTCAACCGCTTTGTAATGCAAAATGAAGGCAGATTATTCATTTCCAGCTACCCAAAATCTTTCAGAGATTTGGTTGGTAAAAATGGTGTGATCACAGTGCAAGGAGAGCAGCAAAGGAAACTACATGGAATTGCCTCCAATATGATGCGTCTGGAGAAGCTTAAGTTCCACTTCTTGAATGACATCCAAAAGGTCATGCTCCAAACTTTGAGCAATTTCAACAACAACCAAGTCATTCTTCTCCAAGATGTTTGCAGGAAAGTGGCTATACATTTAATGGTTAATCAACTATTGGGGGTTTCAAGTGAGTCTCAAGTCAATGAAATGGCTCAGTTGTTTTCTGACTTTGTTGATGGTTGTTTATCCATTCCTATCAACATCCCTGGCTATGCATACCACACTGCTATGAAGGCAAGGGAGAATATCATAAGCAAGATAAACAAAATCATTGAGGAACACAGACAAAATGGTGCTCCCATGGAAGGTAATGGTGTACTAGGAAGATTACTAGAGGAAGAAAGCTTGCCAGATGATGCTGTTGCAGACTTCATTATCAATCTTCTCTTTGCTGGAAATGAAACAACCACCAAAACAATGCTCTTTGCAGTCTATTTCCTTACTCAATGTCCTAGAGCCATGAAGCAGTTGCTGGATGAACTTGGTTCACTGAGGAGTAATTCTGGAGATGAATTACTTACATGGCAGGATTACAAAGCAATGACATTCACTCAATGTGTTATTGATGAAACACTGAGACTAGGGGGCATTGCAATTTGGTTAATGAGAGAAGCAAAAGAAGACGTTCCATATCAAGATTTTGTTATTCCCAAAGGGTGCTTTGTGGTTCCATTTCTTTCAGCAGTCCATTTAGATGAGAAAGTATATAATGGAGCTCTAAACTTCAATCCTTGGAGATGGATGGAACATGAAAATGAGGAAAAGAGAAACTGGAGAAGTAGTCCATTTTATGCACCATTTGGAGGAGGTGCCAGATTCTGTCCAGGAGCAGAGCTGGCTCGCCTTCAAATTGCTGTTTTTCTTCATTACTTTGTTACTACATACAAATGGACACAGACGAAGGAAGATAGGATGTCCTTCTTTCCCTCTGCTCGTTTGGTGAATGGTTTTGAAATCTGCCTAACAAGAAGACATAATGAGACAGATTAA 1455 0.3993 MRENISDSWLVMISVILVTVIFAKIIQFKLRKEDRSKCRLPPGRRGWPLIGDSINWYNAVASSHPPQFVEEMVKRYGKIFSCSLFGKWAVVSADPSFNRFVMQNEGRLFISSYPKSFRDLVGKNGVITVQGEQQRKLHGIASNMMRLEKLKFHFLNDIQKVMLQTLSNFNNNQVILLQDVCRKVAIHLMVNQLLGVSSESQVNEMAQLFSDFVDGCLSIPINIPGYAYHTAMKARENIISKINKIIEEHRQNGAPMEGNGVLGRLLEEESLPDDAVADFIINLLFAGNETTTKTMLFAVYFLTQCPRAMKQLLDELGSLRSNSGDELLTWQDYKAMTFTQCVIDETLRLGGIAIWLMREAKEDVPYQDFVIPKGCFVVPFLSAVHLDEKVYNGALNFNPWRWMEHENEEKRNWRSSPFYAPFGGGARFCPGAELARLQIAVFLHYFVTTYKWTQTKEDRMSFFPSARLVNGFEICLTRRHNETD* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00398 484 PRINTS P450 superfamily signature 341 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00398 484 PRINTS P450 superfamily signature 420 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00398 484 PRINTS P450 superfamily signature 429 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00398 484 PRINTS P450 superfamily signature 286 303 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00398 484 PANTHER CYTOCHROME P450 26 37 454 - -
Lapu4g00398 484 SUPERFAMILY Cytochrome P450 35 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00398 484 CDD CYP90-like 73 478 - -
Lapu4g00398 484 FunFam Cytochrome P450 720B1 family 30 479 - -
Lapu4g00398 484 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 422 431 IPR017972 GO:0005506|GO:0016705
Lapu4g00398 484 Pfam Cytochrome P450 41 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00398 484 Gene3D Cytochrome P450 30 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00398 484 PRINTS E-class P450 group IV signature 277 303 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00398 484 PRINTS E-class P450 group IV signature 336 352 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00398 484 PRINTS E-class P450 group IV signature 385 403 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00398 484 PRINTS E-class P450 group IV signature 413 429 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00398 484 PRINTS E-class P450 group IV signature 67 90 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu4g00398 484 PRINTS E-class P450 group IV signature 429 447 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00398 Lapu-Chr4 3927455 3931216 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00398 1 482 Cytochrome P450 AT1G73340 71.721 0.0 730
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00398 - - gmx:100806921 912.909
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g00398 4 3927455 3931216 Lapu4g00398 4 3927455 3931216 ECH