Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00393 ATGGGTTACAACACCTCCAAAGCATCCTTCTTTGGGAAAATGCTTGGAGAGAAGCAAGTAAACTTCGCAAGTGTAGAACAAGGAGCTTCAGTTATACACCATAGGCTTCAAAGAAAGAAGGTTATCTTGATTCTAGATGATGTTGACAAATACGAGCAATTACAGGCTATTGTTGGAAGACCTGGTTTGTTTGGTCCTGGCAGCAGAGTCATCATCACTACTCGGGACAAACAATTATTGGCATCTTATGGGATTATAAGAATATATGAAGTGAAGGTATTGAATCTGAACAATGCTCTTGACTTGCTTTCATGGAAAGCTTTTAAAACAGAAAAAATTGATGCAAGTTATAAGGAGGTCTTGAATGATTTAGTGATCTATGCTTCTGGCCTTCCACTGGCTTTGGAAGTAATAGGTTCCAACTTGTTTGGAAAAAGTATAGAAGAATGGAAATCTGCTATCAAACAATATAAAAGGATTCCTAATAATCAAATCCTAAAAATACTTAAAGTGAGCCTTGATTCTTTGGAGGAAGAAGAGAAGAGTGTTTTTCTTGACATTGCTTGTTGCTTAAAGGGATACGCCTTGCCACAGGTTGAAGATTTACTTCATGCTCATTATGGTGATTGCATGAAATATCATATGGGGGTGTTGGTTGACAAATCTCTTATAAAGTTTAGTTGGTATGGTAAAGAAACTAGAGTTACATTGCATAACTTGATCGAGGACGTGGGTAAAGAAATTGTCAGACAAGAATCACCGAAAGACCCAGGGAAGCGCAGTAGACTATGGTTGCCAGAAGATATAATTCAAGTTTTGGAAGATGACAAGGGAACTGGTGAAATTGAAATCATATGTCTGGATCTTCCAAAATTTGACAAAGAAGCAATTGTAGAATTCAATACGAAGGCATTCAAGAAGATGAAAAACCTCAAAACACTTATTCTTAGAAATGGTAATTTTTCCAAAGGTCCCAAATACCTTCCAAATAGCTTGAGAGTGTTGGAATGGTGGAGATATCCTTCACATTGTTTACCATCTGATTTTCATCCCAAAAAACTTTCCATATGCAAGTTACCCCATAGCTCCATTACATCCTTTGAGTTGAATGGCTTATCAAAGATACCTGACGTATCCGATCTCCAAAATTTGGAACAACTTTCATTTGAAGATTGTGCGAATTTAATTACAGTTCACGATTCCATTGGTTGTCTGAATAAACTTAAAAAAGTGAGTGCTCATTTTTGCAAAAAGCTTAGGAGTTTTCCACCAATCAAGTTGACCTCTCTTGAAAAACTTGACCTTTCATTTTGTTACAGTCTTGAGGGTTTTCCAGAAATATTAGTAAAGATGGAAAACATAAGGGAACTTCATTTGGTGGACTCTCCCATAACAGAATTGCCACTTTCATTTCAAAATCTTACCGGGCTTCCAGAATTAGAAATGTTCTTTTCAAGTAGTGCAATTGTTAAGGTGCCAAGTAGCATCATCATGATGCCAAAACTGACTGGTATCTCCGCCAATGGATTGAAAGGGTGGCAATGGCTCGAACAGGAAGAGTGTGAAGAACAAATGGGGCCAGTAGTAGTACCTTCAAAGGTAGAATGCCTTAGTGTCTCAAGTTGCAACCTCTATGATGATTTTTTTTCGATAGATTTCACGAGGTTTGCTCATGTGAAGGAATTAATCTTATCTAAGAATAATTTCACCATCCTTCCTGAATGTCTGAAACAATGCCATTTTTTATGGTGTCTTGATGTGAGTCGTTGCATGCATCTTCGGGAAATTAGAGGGATTCCACCAAACTTAAAGCATTTCTTTGCAATAAGATGTAAATCACTGGCTTCCTGGAGTAAACGCGTGCTCCTAAAGCAGGTTTTGTCATGTTTGAAA 1893 0.3745 MGYNTSKASFFGKMLGEKQVNFASVEQGASVIHHRLQRKKVILILDDVDKYEQLQAIVGRPGLFGPGSRVIITTRDKQLLASYGIIRIYEVKVLNLNNALDLLSWKAFKTEKIDASYKEVLNDLVIYASGLPLALEVIGSNLFGKSIEEWKSAIKQYKRIPNNQILKILKVSLDSLEEEEKSVFLDIACCLKGYALPQVEDLLHAHYGDCMKYHMGVLVDKSLIKFSWYGKETRVTLHNLIEDVGKEIVRQESPKDPGKRSRLWLPEDIIQVLEDDKGTGEIEIICLDLPKFDKEAIVEFNTKAFKKMKNLKTLILRNGNFSKGPKYLPNSLRVLEWWRYPSHCLPSDFHPKKLSICKLPHSSITSFELNGLSKIPDVSDLQNLEQLSFEDCANLITVHDSIGCLNKLKKVSAHFCKKLRSFPPIKLTSLEKLDLSFCYSLEGFPEILVKMENIRELHLVDSPITELPLSFQNLTGLPELEMFFSSSAIVKVPSSIIMMPKLTGISANGLKGWQWLEQEECEEQMGPVVVPSKVECLSVSSCNLYDDFFSIDFTRFAHVKELILSKNNFTILPECLKQCHFLWCLDVSRCMHLREIRGIPPNLKHFFAIRCKSLASWSKRVLLKQVLSCLK 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00393 631 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 187 IPR027417 -
Lapu4g00393 631 Gene3D - 93 172 IPR042197 -
Lapu4g00393 631 Gene3D Ribonuclease Inhibitor 443 631 IPR032675 -
Lapu4g00393 631 Gene3D - 173 247 IPR036388 -
Lapu4g00393 631 Gene3D Ribonuclease Inhibitor 285 442 IPR032675 -
Lapu4g00393 631 Gene3D - 6 87 IPR027417 -
Lapu4g00393 631 PRINTS Disease resistance protein signature 128 142 - -
Lapu4g00393 631 PRINTS Disease resistance protein signature 425 441 - -
Lapu4g00393 631 PRINTS Disease resistance protein signature 35 49 - -
Lapu4g00393 631 SUPERFAMILY "Winged helix" DNA-binding domain 164 274 IPR036390 -
Lapu4g00393 631 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 446 IPR044974 GO:0006952
Lapu4g00393 631 Pfam NB-ARC domain 19 174 IPR002182 GO:0043531
Lapu4g00393 631 SUPERFAMILY L domain-like 292 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00393 Lapu-Chr4 3892594 3902296 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00393 29 509 WRKY Transcription Factor Family AT4G12020 34.043 2.38e-59 214