Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00386 ATGTCAGCATTCTTCAGCTATGATGTGTTCCTCAGCTTCAGAGGCTCTGATACTCGCTACGGTTTCACTGGGAATCTCTACAAAGCTCTTTGTGACAAGGGAATCCATGCCTTTATTGACGATGAGGAGCTTCAAAGAGGAGATGAAATCGGAGAAGCACTTGTTGAGGCCATTAAACAGTCTAGGATGGCCATTGTTGTGTTCTCCAAGAACTATGCATCTTCTTCCTTTTGCTTAGATGAACTTGTCAAAATCATTGACTGTGTCAAGGCAAAGGGTCGCTTGATTTTGCCCATTTTTTACGACATCCACCCTTCTCATGTTCGACGCCAGTCTGGAAGTTATGCAGAAGCTTTGGCCATGCACGAGGAAAGATTCACAAGTAGCAACCAAAACCTGAATGATAACATGGACAGATTGCAAAAGTGGAAGATGGCTCTTAGTCAGGCAGCTAATGTGTCCGGCAAGCATTACAAACTTGGAAATGAATATGAATATGAGTTTATAGGGACGATAGTTAGAGAGGTCTCCGACAAGATAAACCGCAGACCTTTGCATGTTACGGATTACCCCGTTGGGATGGAGTGTCGAGTGCAAAAAGTAAAGTCACTTCTTCAACTTGGATCTGATATTGGAGTTCACATTGTTGGGATTCATGGAATAGGCGGAATGGGGAAGACAACACTTGCTCGAGCAGTTTACAACTCAATTGCAGACCAATTCGAAGGTTTATGTTTTCTTGATGGTGTGAGAGAAAACGCTGTTAAACACGGATTAGTACATCTCCAAGAGATGCTTCTTTCTGAAATAGTTGGAGAGAAGGATATTAAGATAGGAAGTGTTAGTAAAGGAATTTCAATAATAAAGCATAGGCTCCAGCGAAAGAAGGTTCTTTTGATTCTTGACGATGTTGACAAACTAGAACAAGTGCGAGCAACTGTTGGAGAGCCTAATTGGTTTGGTTCTGGCAGTAGAGTCATCATAACAACTAGGGACAAACATTTGCTTCATGGGGTTGATGGACAATATGAGGTAGAGGATTTAAATGAAGAAGAAGCACTTGAATTGCTTAGTTGGAATGCTTTTAAAGATGACAAAGTTGATCCAAGTTACAAGGACATTTTAAACCAAGCAGTGGCTTATGCTTCTGGCCTTCCACTAGCTTTGGAAGTAATAGGTTCCTTGTTGTTTGGGAAAGGTATAAGAGAATGGAAATCTGCATTAGATGAGTTCAGAAAGATCCCCAACAAAAGGATCCAAGACATACTTAAGGTAAGCTATAATGCTTTAGAGGAAAATCAGCAGAGAATTTTTCTGGACATTGCTTGCTGCTTGAAAGGATATGAAATCGAAGAGGTTGAAGATATACTTGGTGCTCATTATGGTGTTTGCATGAAATATGGTATAGGAGTGTTGGTGGATAAATCTCTCATAAAAGTTAAGAATGGATGTGTGACACTTCATGAATTGATAGAGGTTATGGGTAAGGAAATTGATCGCCAAGAATCACCCAAAGAGCTTGGGAAACACAGGAGGTTATGGTTCCATAAAGATATAATTCAAGTTTTAGCAGGAAATACAGGGACTAGTGAGATTGAAATCATCTGTTTGGATTTCCCCTTATTTGAAGAAGATGAAGAAGTATTTGTAGAATGGGATGGAGGGTCCTTCAAGAAGATGGAAAACCTCCAAACACTAATTATTAGAAACTCTCATTTTTCAAAAGGTCCAACACATCTTCCAAATAGTTTAAGAGTATTAGAATGGTGGACATATCCATTACAGGATTTACCAACTGATTTTCATCCAAAAGAACTTGCCATATGCAAATTACCCAGAAGTTGCTTTACATCACTTGAGTTAGCTACCATATCAAAGAAGTTCATGAATCTGACAGTTTTAAATTTTGACGGGACTGAATGTTTGACAAAAATACCTGACATATCCAGTCTCCAAAATTTAGAAAAACTGACATTTGAGTGTTGTGAGAATTTAGTAGCAATTCATGATTCTGTGGGTTTTCTTGATAAACTTAAAGTCTTGAGTGCTTTTGGTTGCAGCAAGCTTACGAGTTTTCCACCCATCAAGTTGATCTCTCTTGAACAACTTGATCTTTCATCTTGTTCAAGTCTCGAGAGTTTTCCAGAAATATTAGGAAAGATGGAAAACATAACACAGCTAGAGTTGAAGTACACTCCCTTAAAAGAATTCCCATTTTCGTTTAGAAATCTTGCCCGACTTCAGGATTTGGTGCTAGTTGACTGTGGAAATGTTCAGTTGCCGAGTAGCATTGTCATGTTGCCAGAACTGGCTGAGATTTTCGCCCTGGGATGTAAAGGGTGGCTGTTGCCAAAGCAAGATGAGGATGATGAAGAAAAAGTAAGCTTAGTGTCTTCAAATGTAAAATGTCTTTGTCTCTCGGGCTGCAATCTATCAGATGAATATTTTCCCATGGTTTTAGCATGGTTCGGTAATGTAAAAGAGTTAGAGCTATCGAGCAATAGCTTCACATTTCTTCCTGAATGCATCAAAGAATGTCGCTCTTTAAAATTACTTAATTTGGATAACTGTGAGCATCTTCGAGAAATTAGAGGGATTCCACCAAATTTAGAATATTTCTCTGCTGGAAATTGCAAATCCTTGAGTTTCTGCTGTTCAGCCATGCTATTGGACCAGGAACTGCATGAGGCTGGAAACACCATGTTTTGTGTGCCAGGATCTAGGATTCCGGAGTGGTTAGAGCAACAAAGTAAAGGTCCATCATTATCTTTCTGGTTTGGTGAAAAGTTCCCTGCATTGGATCTCTGTTTTGTTATTGGGCCAATGGGAAAGGACTCTATTTTGTTTAGACCAGTCATCACCATCAATGGCAACACAATGGAGATACAGTCCTTAACTGAAAAGAGGTTTTGTTTTGACTTCCCAGCTTTAGATTATCATGTACTTATCATTGGTACAAAGTACATGAAGTTTGGAGATAATATGGATAAACCACTATCAAAAAATGAATGGAATCATGCAGTGGTTTCAATTGCTATTGATTTTGAATCAACCCCTAAAGAAATTATTGTCAAGCAAACTGCACTCCATGTAATCAAACCAGAAAGTAATATGATTGATATCCAATTCACTGATCCTTGCAACCAACCATTCTTCAGAGAGAAGCAAAGATTGGTTGACACTGTTGATTGTCACAGACAATTTATGCAGCAGCAAACCACTTTGGTTTCATTGAAACCACATGTGAGACAAGGTAGAAAGTCATTTTCATTGATTCCACCTCAAGCATGCAAAAATAATATGAATTGGCATTCATTTTCAACAGGAACAAGTAGGATTGCCAGTGTCCAGGAAAACGAAATTGCGTCACAGAAATTACATTTGGACATGGGAATTTTGCAATTTGTGCAGCAGCGGAAAAGATTGGCTATTTTGGGTTTGCAGCAACAACGACGCACGGCTTCATTGGATTTACTGCAACGAAGGGGCAGAGAAATGCTTTCGTTACTTTCTTCTCCATCATTGGAGTTAATGATATCATGGCAGAGGAAATGCATCACCACTGTCCAAGGTTTTCAGGAGCAACATTTACCTTCCACCATTGAACAAAACTTTGAAGGTTGCAATGGTATGAATGAAGCAACAGTGAAGGAAGTGATAAAATGCAACAACAAGGATGAAAATGACAATGAGAGAAACCCATTAGTGGAGCAGCTACCAATAACAAAGCAGCTTAAATTTTTCTCTTAA 3750 0.3901 MSAFFSYDVFLSFRGSDTRYGFTGNLYKALCDKGIHAFIDDEELQRGDEIGEALVEAIKQSRMAIVVFSKNYASSSFCLDELVKIIDCVKAKGRLILPIFYDIHPSHVRRQSGSYAEALAMHEERFTSSNQNLNDNMDRLQKWKMALSQAANVSGKHYKLGNEYEYEFIGTIVREVSDKINRRPLHVTDYPVGMECRVQKVKSLLQLGSDIGVHIVGIHGIGGMGKTTLARAVYNSIADQFEGLCFLDGVRENAVKHGLVHLQEMLLSEIVGEKDIKIGSVSKGISIIKHRLQRKKVLLILDDVDKLEQVRATVGEPNWFGSGSRVIITTRDKHLLHGVDGQYEVEDLNEEEALELLSWNAFKDDKVDPSYKDILNQAVAYASGLPLALEVIGSLLFGKGIREWKSALDEFRKIPNKRIQDILKVSYNALEENQQRIFLDIACCLKGYEIEEVEDILGAHYGVCMKYGIGVLVDKSLIKVKNGCVTLHELIEVMGKEIDRQESPKELGKHRRLWFHKDIIQVLAGNTGTSEIEIICLDFPLFEEDEEVFVEWDGGSFKKMENLQTLIIRNSHFSKGPTHLPNSLRVLEWWTYPLQDLPTDFHPKELAICKLPRSCFTSLELATISKKFMNLTVLNFDGTECLTKIPDISSLQNLEKLTFECCENLVAIHDSVGFLDKLKVLSAFGCSKLTSFPPIKLISLEQLDLSSCSSLESFPEILGKMENITQLELKYTPLKEFPFSFRNLARLQDLVLVDCGNVQLPSSIVMLPELAEIFALGCKGWLLPKQDEDDEEKVSLVSSNVKCLCLSGCNLSDEYFPMVLAWFGNVKELELSSNSFTFLPECIKECRSLKLLNLDNCEHLREIRGIPPNLEYFSAGNCKSLSFCCSAMLLDQELHEAGNTMFCVPGSRIPEWLEQQSKGPSLSFWFGEKFPALDLCFVIGPMGKDSILFRPVITINGNTMEIQSLTEKRFCFDFPALDYHVLIIGTKYMKFGDNMDKPLSKNEWNHAVVSIAIDFESTPKEIIVKQTALHVIKPESNMIDIQFTDPCNQPFFREKQRLVDTVDCHRQFMQQQTTLVSLKPHVRQGRKSFSLIPPQACKNNMNWHSFSTGTSRIASVQENEIASQKLHLDMGILQFVQQRKRLAILGLQQQRRTASLDLLQRRGREMLSLLSSPSLELMISWQRKCITTVQGFQEQHLPSTIEQNFEGCNGMNEATVKEVIKCNNKDENDNERNPLVEQLPITKQLKFFS* 1250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00386 1249 Pfam NB-ARC domain 197 433 IPR002182 GO:0043531
Lapu4g00386 1249 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 716 IPR044974 GO:0006952
Lapu4g00386 1249 SUPERFAMILY L domain-like 557 903 - -
Lapu4g00386 1249 Gene3D - 181 346 IPR027417 -
Lapu4g00386 1249 SMART AAA_5 212 349 IPR003593 GO:0016887
Lapu4g00386 1249 FunFam Disease resistance protein (TIR-NBS-LRR class) 4 182 - -
Lapu4g00386 1249 ProSiteProfiles TIR domain profile. 5 180 IPR000157 GO:0007165
Lapu4g00386 1249 Gene3D - 3 180 IPR035897 -
Lapu4g00386 1249 Gene3D - 347 431 IPR042197 -
Lapu4g00386 1249 Gene3D Ribonuclease Inhibitor 791 917 IPR032675 -
Lapu4g00386 1249 SUPERFAMILY "Winged helix" DNA-binding domain 418 523 IPR036390 -
Lapu4g00386 1249 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 441 IPR027417 -
Lapu4g00386 1249 PRINTS Disease resistance protein signature 695 711 - -
Lapu4g00386 1249 PRINTS Disease resistance protein signature 291 305 - -
Lapu4g00386 1249 PRINTS Disease resistance protein signature 215 230 - -
Lapu4g00386 1249 PRINTS Disease resistance protein signature 382 396 - -
Lapu4g00386 1249 Pfam TIR domain 7 181 IPR000157 GO:0007165
Lapu4g00386 1249 Gene3D Ribonuclease Inhibitor 547 786 IPR032675 -
Lapu4g00386 1249 SMART till_3 6 153 IPR000157 GO:0007165
Lapu4g00386 1249 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 155 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00386 Lapu-Chr4 3839581 3845497 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00386 7 778 WRKY Transcription Factor Family AT4G12020 31.875 2.01e-84 302