Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00355 ATGGCTCTGCGTCAAGTAGCTGACTTGTCTGGCTGTCATTTCAAAGACGGTGATGGATACGAATACAAGTTTATTGGGAGTGTTGTGGACTGGGTCTGCCACAACATTAATCCTGCTCGTTTACATGTTGCGGATTACCCAATTGGACTAGGGCCACAAGTGCTAGAACTAAGGAAGCTTTTAAATGTTGACTCTGGTGATGGATTCCACATGATAGCGATCCATGGAATGGGTGGGGTAGGAAAAACAACACTCGCTCTAGCAGTTTATAACTTGATTGCTGTCGATTTTGATTGTTCTTGTTTTCTTCAAAACGTGAGAGAAAAATCAAACAAACATGGGCTAGAACACCTCCAAACCATCCTTCTTTCAAAAATGCTTGGAGAGAAGAATATCAACTTAGCCAGTGAGCATGAAGGAATTTCAGTGATACAGCAAAGGTTGCAGCGAAAGAAGGTTCTCTTGATTCTTGATGACGTTAACAAGTGCGAGCAGTTACAGGCACTGGCCGGAAGCCCAGATTGGTTTGGTCCCGGCAGCAGGATCATCATCACAACTCGAGATACACAACCGCTTGCATCTCATCAGGTTAAAACAACATATAAGGTCAACACATTGAATAGAAAGGATGCTCTTCAGTTGCTTACATGGAAAGCTTTCAAAACGGAAGAAGTTGATCCAAGTTATGTGGAGGTCTTGAATCGGGTAGTAACTTATGCTTCTGGCCTTCCACTGGCTTTGGAAGTAATTGGTTCCAACCTGTTTGCAAAAAGTGTGGAACAATGGAAATCTGCTATCAATCAATATAAAAGGATTCGTAACAATCAAATCCTGGAGATACTTAAAGTAAGCTTTGATGCTTTGGAGGAAGAAGAGAAGAGTGTTTTTCTTGACATTGCTTGTTGCTTGAAAGGATATAAATTGACAGAGGTTGAAATTATGCTTCGTGCTCTTTATGATGACTGCATGAAACATCATATTGGGGTGTTGGGCGAAAAATCTCTCATAAAGGTTAGTCGGAGTGGAATAGTTAAATTGCACGACCTGATTGCGGACATGGGTAGACAAATTGACCAGAAAGAATCACCCAAAGAGGCAGGGAAGCGCAGGAGATTATGGTTACCTAAAGATATAATTCAAATTCTAAAATACAACAGGGGAACTAGTGAAATTGAAATGGTATGTCTGGATTTGCCCATATCTGACAAAACAGAAGTGGTGGAATGGAATGGAGAGGCCTTCAAGGACATGGAAAACCTCAAAATACTTATTATTAGAAATTGTAAATTTTCCAAAGGTCCCAAATATCTTCCAAATAAGTTGATAGTACTGGAATGGCGGAGTTATCCTTCACATTGCTTACCATATGATTTTCATCCCAACGAACTTGTCATATGCAAATTACCTTATAGTTGCTTTACGTCATTTGAGTTCCATGGCTCATCCAAGAAGTTCGAGAATCTAACCGTCTTGAATTTTGACTACTGCAAACTTTTAACACGAGTACCTGACGTATCTGATCTCTCAAATTTGGAGAAACTTTCATTTAAAAGGTGTGAAAGTTTAGTTGCAGTTGACGACTCAGTTAGTTTTCTGACTAAACTTAAAATATTAAATGCTGAAAGTTGCGAGAAGCTTAGGAGATTTCCACCGCTCAACCTGACCTCTCTTGAAAGACTAGAACTTTCATATTGTTTGAGTCTTGAGAATTTTCCAGAAATATTGGGAGAGATGGGAAACATAAAGGAACTTCGTTTGTCTAAACTTCCCATAAAAGAATTGCCAGATTCATTTCTTAATCTTACTGGACTCCAAGAGTTAGAAGTGAGATGTGATTTTGTTGAGTTAAGCAACAAT 1857 0.3936 MALRQVADLSGCHFKDGDGYEYKFIGSVVDWVCHNINPARLHVADYPIGLGPQVLELRKLLNVDSGDGFHMIAIHGMGGVGKTTLALAVYNLIAVDFDCSCFLQNVREKSNKHGLEHLQTILLSKMLGEKNINLASEHEGISVIQQRLQRKKVLLILDDVNKCEQLQALAGSPDWFGPGSRIIITTRDTQPLASHQVKTTYKVNTLNRKDALQLLTWKAFKTEEVDPSYVEVLNRVVTYASGLPLALEVIGSNLFAKSVEQWKSAINQYKRIRNNQILEILKVSFDALEEEEKSVFLDIACCLKGYKLTEVEIMLRALYDDCMKHHIGVLGEKSLIKVSRSGIVKLHDLIADMGRQIDQKESPKEAGKRRRLWLPKDIIQILKYNRGTSEIEMVCLDLPISDKTEVVEWNGEAFKDMENLKILIIRNCKFSKGPKYLPNKLIVLEWRSYPSHCLPYDFHPNELVICKLPYSCFTSFEFHGSSKKFENLTVLNFDYCKLLTRVPDVSDLSNLEKLSFKRCESLVAVDDSVSFLTKLKILNAESCEKLRRFPPLNLTSLERLELSYCLSLENFPEILGEMGNIKELRLSKLPIKELPDSFLNLTGLQELEVRCDFVELSNN 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00355 619 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 40 299 IPR027417 -
Lapu4g00355 619 Gene3D Ribonuclease Inhibitor 390 619 IPR032675 -
Lapu4g00355 619 Pfam NB-ARC domain 66 282 IPR002182 GO:0043531
Lapu4g00355 619 SUPERFAMILY L domain-like 408 610 - -
Lapu4g00355 619 Gene3D - 205 289 IPR042197 -
Lapu4g00355 619 Gene3D - 48 201 IPR027417 -
Lapu4g00355 619 SUPERFAMILY "Winged helix" DNA-binding domain 276 383 IPR036390 -
Lapu4g00355 619 PRINTS Disease resistance protein signature 240 254 - -
Lapu4g00355 619 PRINTS Disease resistance protein signature 552 568 - -
Lapu4g00355 619 PRINTS Disease resistance protein signature 71 86 - -
Lapu4g00355 619 PRINTS Disease resistance protein signature 147 161 - -
Lapu4g00355 619 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 610 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00355 Lapu-Chr4 3643378 3646072 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00355 48 609 WRKY Transcription Factor Family AT4G12020 32.014 4.36e-67 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00355 - - vun:114181898 884.404