Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00353 TTTCTTGACAACGCCGTCCTTGCAAGCTCTTCACTTGGCTTATTCATTGAATTTTGGTTCAAGAGTCTGAACACATCCACCACCACCACCATCATCACACTAAACTTTCTTCTTATGGCTGTACCATCACCTTCCCAAGCATTCATCTACGATGTGTTTCTCAATTTCAGAGGGTCAGACACACGCCAAGGTTTTACTGGCCATCTCCACAAAGCTCTTCGTGACAGTGGAATCCACGCTTTCATTGATGATGAGGACATTCAGAGTGGAAAGATAATAACACCAGCACTTCAGGAGGCAATTGAAAAGTCAAGGATTGCCATCACTGTGCTCTCTACAAACTATGCTTCTTCTTCCTTCTGTTTGGATGAACTTGCAATCATTCTTGACTGCTCCAAAAGGACAGGACTGTTGGTGTTGCCTGTCTTTTACAAGGTGCCTCCTTGTGATGTCAGACACCAGCAAGACATTTATGGAAAAGCGTTGACTCGGCTTGAGAAAAGGCTCCACCATAACATGGAGAAATATAAGACGGCACTGAAAGAAGTAGCTGACCATAGAGGCTTTTCTTTCGAGGATGGAAAAGGGTATGAACACAAGCTTATTGAGAAGATTGTTGAGCGCGTCTCCACGAGCTTGATTAATAATGGCGAAGAAGGAATTCATGTTGCGGATGACCCAGTTGGGCTATGGTCACAGGTGGAAGAAATAAAGAAGCTTTTGGATGTTGGATGTGGTGATGGTGTCCACATGATAGGGATCCACGGAATGGGCGGTGTAGGAAAATCAACACTTGCTCGAGCAGTGTATAACTCAATTAGTGATCAATTTGATGGTTCATGTTTTCTTCAAAATGTAAGAGAAGAATCAAAGAAACATGGGTTAAAACACCTTCAAAGCATCATTCTTTCACAGGTACTTGGAATGAAGGAAATCAACTTCGCAAGTGAGCAACAAGGAATTTCAGTAATAAAAAATAGGCTCAAACGAAAGAGGGTTCTCTTAATTCTGGATGATGTAGACCAGCACAAGCAATTACAGGGAACTGTCGGAAGACCTGATTGGTTTGGTCCCGGCAGCAGAGTCATCATCACCACTCGCGACAAACAACTTCTAGCATCTCATGAGGTTAAAAGAACACATGAGGTGAAGGAATTGAATAAGAAAGATGCTCTTAAGTTGCTTAAATTGAAAGCTTTTAAAACGGAAGAAGTTGATGCAAGTTACATGGAGGTATTGAATCAGGTAGTAACTTGTGCTTCTGGTCTTCCATTGGCTTTGGAAATAATAGGTTCCAACTTGTTTGGAAAAAGTGTACAAGAATGGGAATCTGCTATCAAACACTATAAAAGAATTCCCAATAATCAAATCCTAGAGGTACTTAAAGTAAGCTTTGATGCTTTGGGAGAAGAAGAGAAGAGTGTTTTTCTTGACATTGTTTGTTGCTTCAAAGGGTATAAATTGTCAGAGGTTGAAGAGAAACTCCGTGCTCTTTATGATAACTGCATGAAATACCATATCGGGGTGTTAGTTGAAAAGTCTCTCGTAAAGATTAGTCATGATGACAGAGTTACATTTCATGACTTGATTGAGGACATAGGTAAAGAAATTGACCGTCAGCAATCACCGAGAGAGCCAGGGAAGCGCAGGAGATTATGGTTACAGAAAGATATAATTCAAGTTTTAAAAGAAAAATCGGGAACTAGTGAAATCAAAATTATCCGTTTGGATTTTCCCATATCCGACAACCAAGAAGTAGAATGGGATGGAAATGCTTTCATGCAGATGAAA 1791 0.4065 FLDNAVLASSSLGLFIEFWFKSLNTSTTTTIITLNFLLMAVPSPSQAFIYDVFLNFRGSDTRQGFTGHLHKALRDSGIHAFIDDEDIQSGKIITPALQEAIEKSRIAITVLSTNYASSSFCLDELAIILDCSKRTGLLVLPVFYKVPPCDVRHQQDIYGKALTRLEKRLHHNMEKYKTALKEVADHRGFSFEDGKGYEHKLIEKIVERVSTSLINNGEEGIHVADDPVGLWSQVEEIKKLLDVGCGDGVHMIGIHGMGGVGKSTLARAVYNSISDQFDGSCFLQNVREESKKHGLKHLQSIILSQVLGMKEINFASEQQGISVIKNRLKRKRVLLILDDVDQHKQLQGTVGRPDWFGPGSRVIITTRDKQLLASHEVKRTHEVKELNKKDALKLLKLKAFKTEEVDASYMEVLNQVVTCASGLPLALEIIGSNLFGKSVQEWESAIKHYKRIPNNQILEVLKVSFDALGEEEKSVFLDIVCCFKGYKLSEVEEKLRALYDNCMKYHIGVLVEKSLVKISHDDRVTFHDLIEDIGKEIDRQQSPREPGKRRRLWLQKDIIQVLKEKSGTSEIKIIRLDFPISDNQEVEWDGNAFMQMK 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00353 597 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 50 577 IPR044974 GO:0006952
Lapu4g00353 597 Pfam NB-ARC domain 233 450 IPR002182 GO:0043531
Lapu4g00353 597 Gene3D - 385 469 IPR042197 -
Lapu4g00353 597 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 224 479 IPR027417 -
Lapu4g00353 597 FunFam Disease resistance protein (TIR-NBS-LRR class) 46 215 - -
Lapu4g00353 597 PRINTS Disease resistance protein signature 327 341 - -
Lapu4g00353 597 PRINTS Disease resistance protein signature 251 266 - -
Lapu4g00353 597 PRINTS Disease resistance protein signature 420 434 - -
Lapu4g00353 597 SMART till_3 49 186 IPR000157 GO:0007165
Lapu4g00353 597 SMART AAA_5 248 390 IPR003593 GO:0016887
Lapu4g00353 597 Pfam TIR domain 50 212 IPR000157 GO:0007165
Lapu4g00353 597 SUPERFAMILY "Winged helix" DNA-binding domain 456 563 IPR036390 -
Lapu4g00353 597 SUPERFAMILY Toll/Interleukin receptor TIR domain 45 188 IPR035897 -
Lapu4g00353 597 Gene3D - 221 382 IPR027417 -
Lapu4g00353 597 ProSiteProfiles TIR domain profile. 48 213 IPR000157 GO:0007165
Lapu4g00353 597 Gene3D - 44 217 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00353 Lapu-Chr4 3639573 3642084 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00353 228 565 WRKY Transcription Factor Family AT5G45050 35.817 6.56e-54 196