Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00352 ATGAAACTTTTGGATGTTGGATGTGATGGTGGTGTCTACATGATAGGGATACATGGAGTTGGTGGGGTAGGAAAATCAACACTTGCTCAAGAAGTTTATTATAATTTGATTGCTGACCAGTTTGATGCTTCATGTTTTATTGAAAATGTGAGAGAAAAATCAAACAAGCATGGGTTACAATACCTCCAAAGCATCCTTCTTTCGAAAATACTTGGAGAGAAGGATATCAAGTTAACAAGTGTGCAACAAGGAACTTCAGTGATACAACGTAGGCTCCAGAAAAAGAAGGTTCTCTTGATTTTAGATGATGTTGATAGGCAGGAGCAGTTGCACGCAGTTGTTGGAAGACCTGATTGGTTTGGTCCTGGCAGCAGAGTCATAATCACAACACGAGAGGAACAACTGCTAGCCTCCCATGGTGTTCAAAGGACTTATCAGGCGAAGGAATTAAATAAGAATAATTCTCTTGGATTACTTAAATGGAAAGCTTTTAAAATGAAATACTATGATCCAAGGTATGAGGAGCTCTTGAATCGTGTTGTAACTTTTGCTTCTGGCCTTCCATTAGCTTTGGAAGTAATAGGTTCCAACTTGTATGGAAAAAGTGTAGAAGAATGGAAATCTGTCATCCATCAATTTGAAAAATGTCCTAATAATCCACTCCAAACAATACTTAAAGCAAGCTGTGATTCTTTGGAGGAAAAAGAGAGGAGTGTTTTTCTTGATATTGCTTGTTGCTTCAAAGGATATGAATTGGCAGAGGTCGAAGATATACTTCAAGCTCATTATGGTCAGAGCATGAAGTATTACATTGACAAATTGGTTGATAAATCTCTAGTAAAGCTTAGTCATGGTACAAAACCTTGTTATGATAGAGTTACATTGCATGATTTGATTGAGGACATGGGTAAAGATATTGTCCGACAGGAATCACTGATAGAACCAGGTGAGCGCAGGAGATTATGGTTACTGGAAGATGTCAGAGAAGTTTTAAAAAACAACACGCTACCATACTCCAATGATGTGATGGAACCATTGGGTAACTCCTATGGCAAGTTCTCTGGATGA 1068 0.382 MKLLDVGCDGGVYMIGIHGVGGVGKSTLAQEVYYNLIADQFDASCFIENVREKSNKHGLQYLQSILLSKILGEKDIKLTSVQQGTSVIQRRLQKKKVLLILDDVDRQEQLHAVVGRPDWFGPGSRVIITTREEQLLASHGVQRTYQAKELNKNNSLGLLKWKAFKMKYYDPRYEELLNRVVTFASGLPLALEVIGSNLYGKSVEEWKSVIHQFEKCPNNPLQTILKASCDSLEEKERSVFLDIACCFKGYELAEVEDILQAHYGQSMKYYIDKLVDKSLVKLSHGTKPCYDRVTLHDLIEDMGKDIVRQESLIEPGERRRLWLLEDVREVLKNNTLPYSNDVMEPLGNSYGKFSG* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00352 355 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 331 IPR044974 GO:0006952
Lapu4g00352 355 Gene3D - 149 233 IPR042197 -
Lapu4g00352 355 PRINTS Disease resistance protein signature 14 29 - -
Lapu4g00352 355 PRINTS Disease resistance protein signature 184 198 - -
Lapu4g00352 355 PRINTS Disease resistance protein signature 91 105 - -
Lapu4g00352 355 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 243 IPR027417 -
Lapu4g00352 355 SUPERFAMILY "Winged helix" DNA-binding domain 221 332 IPR036390 -
Lapu4g00352 355 Gene3D - 1 143 IPR027417 -
Lapu4g00352 355 Pfam NB-ARC domain 4 232 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00352 Lapu-Chr4 3636234 3639466 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu4g00352 4 326 WRKY Transcription Factor Family AT5G45050 32.941 1.90e-43 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00352 - - pvu:PHAVU_004G140500g 594.349